Gene Amir_4112 details

Gene Information

• Locus tag: Amir_4112
• ID: 8328305
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: -
• Start bp: 4830237
• End bp: 4832240
• Gene Length: 2004 bp
• Protein Length: 667 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 644944576
• Product: ASPIC/UnbV domain protein
• Protein accession: YP_003101813
• Protein GI: 256378153
• TIGRFAM ID: [TIGR01168] Gram-positive signal peptide, YSIRK family

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCGTGCG GCGGGGAGAT CATGGCTGAT TTTGCTGAGC GAACGCGGAA ACTGGTTCCG 
GGCGTGGTGA CCGTCCTCGT CGGCGCGTCC CTGCTGGCGG TCGGGCACAA CGCCGTCGCG 
GTTCCCGGAG CGCACGACAT CGCCGTGCAG TACGGGTTCC GGGAGCTGCC CATCGAGCTG 
CCACCCGGCT ACGAGGACCG GCCGATGAAG GACGTGCGGG AGGTGAACCC GGAGTTCCAC 
CGCATCCGCA GCTGGATCTC CTCGGTCGGC GCGGGCATCG CCCTCAACGA CCTCACCGGC 
CACGGGCGCG CGAACTCGCT GTGCATCGTG GACCCGCGCA CCGACGAGGT GATCGTGACC 
CCGGCGCCGA CCGCGCCCGA GGAGGACCGG TTCGCGCCGT TCCTGCTCGA CCCCGCGCCG 
CTGCCGGTGG GCCGCGCGAT GGCCCCGACC GGCTGCACGC CGGGCGACTT CAACGCGGAC 
GGCCGCGCGG ACCTGCTGGT GAGCTACTGG GGGCGCACCC CGGTGCTGTA CCTGGCCAAG 
GAGAGCGCGG AGCGCGTCGA ACTCGCCTCC TACCGGCCGA CCGAGCTGGT CCCGCAGGTC 
ACGCAGGACG GCGACTACCA CGGGCCCAAG TGGCACACCA ACGCCGTCAC GGTCGGCGAC 
CTGGCGGGCA ACGGCCGCCC GGACATCATC ATCGGCAACT ACTTCCCCGA CTCCGACGTG 
CTGGACCCGC AGGGCCAGAA CAACGTCTCC ATGAACGACT CGCTGTCCAG GGCCCTCAAC 
GGCGGCGGCA ACCACGTGCT GCGCTGGCGC TCCGGCTCGG CGGGCGAGGA GCCCGAGGTC 
AGCTACGTGC AGGAGGACGC GGCGATCCCG CACCTGGCGG CCAACGGCTG GACCCTCGGG 
CTCAGCAACG CCGACATGAC CGGCGACGGC CTGCCCGAGG TGTACATCGC CAACGACTTC 
GGCCACGACT TCATGCTGCA CAACACCTCC ACGCCCGACC GCATCCGGTT CGCCCCGGTC 
CTCGGCACCC GCACCCCGAC CACGCCCAAG TCGTTCGTGC TGGGCAAGGA CTCGTTCAAG 
GGCATGGGCG TGGACTTCGC GGACGTGGAC CGCAACGGCA GCTTCGACAT GGCCGTCAGC 
AACATCACCA CCGCCTGGGG CCTGGAGGAG AGCCACTTCC TGTGGGTCAA CGACGCGGCC 
GAGCCGAAGG CGCAGGCCGA GGCGATGGGC GGCGGCAAGG CGCTGTTCAC CCAGCGCGGC 
CAGGAGCTGG CCACCGCGTG GTCCGGCTGG GGCTGGGACA TCAAGATGGG CGACTTCGCC 
AACACCGGCA ACCTGGACGT CGTCCAGACA ACCGGGTTCG TCAAGGGCGA CACCGACCGC 
TGGCCGTGGT TGCAGGAGCT GGCCATGTCC AACGAGATGC TGGTGTCCAA CCCGGTCATG 
TGGCCCACCC TGCAGCCCGG CGACGACATC TCCGGCCACG AGGCTCCCGC GTTCTTCGCC 
AGGGGCCGCC ACGAGGAGCA GTTCGTCAAC ATCACCGGCG AGCTGGGCCT CGGCGTGCAC 
CACCCGAGCC GGGGCATCGC CATGGGCGAC AGCACCCGCA GCGGCGCGCT CGACCTGGCC 
ATCGCCCGCC AGTGGGGCCC GCCCTCCTTC TACGCCAACA CCGCGCCCGA CCGGGGCGGC 
TACCTGACGC TGCACCTGTA CCGCCCGGTG GACCGGCCGA ACACCGGCCT CACCGGACCG 
GGCAGCCCCG CCTACGGGGC CACCGTCACC GCCCGCACCC CCGACGGCAG GCAGCAGGTC 
TCGCAGCTCG ACGGCGGCAG CGGCCACGGC GGCAAGCGCA GCTTCGACGT CCACTTCGGG 
TTCGGCGACT ACACCGGCCC GGTCGAGCTG ACGCTGTGCT GGCGCGACCT CGACGGGCGG 
CTGCACGAGC AGACCACGAC GGTCGACCAG GGCGACCGCA CCCTCTACCT GACCAGCACC 
GCACAGGAGG TCCCGGTCCG ATGA 

 

Protein sequence

MACGGEIMAD FAERTRKLVP GVVTVLVGAS LLAVGHNAVA VPGAHDIAVQ YGFRELPIEL 
PPGYEDRPMK DVREVNPEFH RIRSWISSVG AGIALNDLTG HGRANSLCIV DPRTDEVIVT 
PAPTAPEEDR FAPFLLDPAP LPVGRAMAPT GCTPGDFNAD GRADLLVSYW GRTPVLYLAK 
ESAERVELAS YRPTELVPQV TQDGDYHGPK WHTNAVTVGD LAGNGRPDII IGNYFPDSDV 
LDPQGQNNVS MNDSLSRALN GGGNHVLRWR SGSAGEEPEV SYVQEDAAIP HLAANGWTLG 
LSNADMTGDG LPEVYIANDF GHDFMLHNTS TPDRIRFAPV LGTRTPTTPK SFVLGKDSFK 
GMGVDFADVD RNGSFDMAVS NITTAWGLEE SHFLWVNDAA EPKAQAEAMG GGKALFTQRG 
QELATAWSGW GWDIKMGDFA NTGNLDVVQT TGFVKGDTDR WPWLQELAMS NEMLVSNPVM 
WPTLQPGDDI SGHEAPAFFA RGRHEEQFVN ITGELGLGVH HPSRGIAMGD STRSGALDLA 
IARQWGPPSF YANTAPDRGG YLTLHLYRPV DRPNTGLTGP GSPAYGATVT ARTPDGRQQV 
SQLDGGSGHG GKRSFDVHFG FGDYTGPVEL TLCWRDLDGR LHEQTTTVDQ GDRTLYLTST 
AQEVPVR