Gene Amir_4105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4105 
Symbol 
ID8328298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp4824164 
End bp4824862 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content75% 
IMG OID644944570 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003101807 
Protein GI256378147 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTCCGC GAAAGCTCGC ACCCGAGACG CGCACGGCGC TGGTCGACAT CGCGGGGCGG 
CTGCTGGCCG AGCACGGCGC GCAGGCCCTG TCCACCCGCC GCATCGCCGC CGAGGCGGGC 
ACCTCCACCA TGGCCGTGTA CACCTACTTC GGCGGCATGA GCGGCCTGGT GCGCGCCATG 
GCGCACGAGG GCTTCGCCCG GCTGGAGCGG CAGTTCGGCC GGGTCAGGCA CACCGACGAC 
CCGGTGGCGG ACGTGCTGGT GCTCGGGCAC GCCTACCGGC ACAACGCGAA GGCCAACTCG 
CACCTGTACG CGGTGATGTT CGGCGGCCAG TCGCTGGCGG GCTTCTCGCT CACCGAGGAG 
GACCGCCAGT ACGGCCGGTA CACCCTGCTG ACCGCCGTCG AGCGGGTGAC CAGGTGCATC 
GCGGCGGGGC GCTTCCGCGA GGGCGACCCG GCGCTGATAG CGCACGAGAT GTGGATCGCC 
ACGCACGGCC TGGTGAACCT GGAGCTGGGC GGCTACCTGA TCCCGCCGGT GGACGCGGAG 
CGCTGCTACG CGGCGCTGCT GTGCGGCCTG GTCGCCGGGG CCGGGGACGA CGCGGCGTCG 
GCCGGGCGTT CGGTGGCGCG GGCCGAGCGC AGGCGGCGGG CCGAGGTGGA GGCGGCGCGG 
GACGGGGACG TCGCGGCCGA CGAGGACGTG GGCGCTTGA
 
Protein sequence
MSPRKLAPET RTALVDIAGR LLAEHGAQAL STRRIAAEAG TSTMAVYTYF GGMSGLVRAM 
AHEGFARLER QFGRVRHTDD PVADVLVLGH AYRHNAKANS HLYAVMFGGQ SLAGFSLTEE 
DRQYGRYTLL TAVERVTRCI AAGRFREGDP ALIAHEMWIA THGLVNLELG GYLIPPVDAE 
RCYAALLCGL VAGAGDDAAS AGRSVARAER RRRAEVEAAR DGDVAADEDV GA