Gene Amir_4082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4082 
Symbol 
ID8328275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp4792223 
End bp4792681 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content69% 
IMG OID644944547 
Producthypothetical protein 
Protein accessionYP_003101784 
Protein GI256378124 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.959474 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGACT ACTACGAGAT CCGCCACGTT GTGGGCTTCG AGGAGACCAA CCTCGTGGGC 
AACGTCTACT ACGTCAACTA CCTGCGCTGG CAGGGCCGCT GCCGGGAGAT GTTCCTGAAG
GAGAAGGCGC CCGCCGTGCT CGCCGAGGTC CGGGACGACC TGAAGCTGTT CACGCTCAAG
GTGGAGTGCG AGTTCTTCGC CGAGATCACC GCGTTCGACG AGCTGTCGGT GCGGATGCGC
CTCGAGGAGC TGACCCGCAC GCAGGTGCAG TTCAGCTTCG ACTACGTCAA GGTCACCGAC
GGCGAGGAGT CGCTGGTGGC GCGCGGGAGG CAGCGGGTGG CCTGCATGAG GGGCCCGAAC
ACGCACACCG CGCCCACGCC CGTCCCCGAG GAGCTGCGCC GCGCGCTGGA GCCGTACGCG
CAGCCGTCCG CGCGGGCCGG GGCGGTGGTG GCGTCGTGA
 
Protein sequence
MTDYYEIRHV VGFEETNLVG NVYYVNYLRW QGRCREMFLK EKAPAVLAEV RDDLKLFTLK 
VECEFFAEIT AFDELSVRMR LEELTRTQVQ FSFDYVKVTD GEESLVARGR QRVACMRGPN
THTAPTPVPE ELRRALEPYA QPSARAGAVV AS