| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4080 |
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| Symbol | |
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| ID | 8328273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 4790664 |
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| End bp | 4791674 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644944545 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_003101782 |
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| Protein GI | 256378122 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.234501 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGTCA CGCTCACCGG CGGCACCGGT TTCGTCGGCG CCCACACCAC CGCCGCGCTG
GTGCGCGCGG GCCACCACGT CCGCCTGCTC GTCCGCGACC CCACCGCCGT CCCCACCGCC
CTGGACCCGC TGGGCGTGGA CCTGTCCGCC GTGGACGCCG AGGTCGGCGA CGCCACCGAC
GAGGCAGCCG CGACCAGGGC CGTGCGCGGC GCGGACGCCG TCCTGCACGC CGCCGCGGTC
TACTCCTTCG ACCGCCGCAG GCGCGCCGAG ATGCTCCGCG TCAACACCAG GGCCACCGAG
GTCGTCCTGT CCGCCGCCCG CCGCTCCGGC GCGGCCCGGA TCGTGCACGT CTCCAGCACC
GCGGCCCTGT TCGGCCCCGG AGTGCGCGTG GTCGACGACC ACACCCCGCC AGGAGCCAGC
CGCGAGCCGT ACGCGGCGAC CAAGTCCGCC TCGGAGGCGA TCGCCGGGGC GCACCAGCGC
GCGGGCGCCC CCGTGGTGAT CAGCAGACCA CCCGCCCTGC TCGGCCCGCA CGACCCGAAG
ACCGGCGACC AGACCCGCAG GCTGCGCGAC ACGGTGCGCG GCATCATGCC GGTGTGGCCG
TCCGGCGCCC TCCAGATCGG CGACGTCCGC GACACCGCGC GGCTGCACAC CACCCTGCTG
GAAGGCCGGG CCGGGGGAGC CCACTTCGGC CCTGGGCGCC TGATCACCAC CCCCGAGTAC
GTGGCCGAGG CCCGCAGGGC CAGTGGCCGC CCCCTCCCCA CCGTCTTCCT GCCCGCTGCC
CTGGTGACCC CCGTCGGCAG GCTGGTGGAC CTCCTCCAAC CGTTCTGGCC CTGGCACATC
CCCGCCGCGC ACGGCGCGAT CACCACCGCC GCGGCGTCGG TGTCGGTGGC CCCCGCCGCC
AGCACCCTGG GCCTGACCCC ACGCCCGTTC GCGGACACCG TCGCCGACAC CCTGGACTGG
CTGGTCGCCA CCGACCAGCT CCACCCCCGA ACCCGCACAC CCGTCACCTG A
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| Protein sequence | MLVTLTGGTG FVGAHTTAAL VRAGHHVRLL VRDPTAVPTA LDPLGVDLSA VDAEVGDATD
EAAATRAVRG ADAVLHAAAV YSFDRRRRAE MLRVNTRATE VVLSAARRSG AARIVHVSST
AALFGPGVRV VDDHTPPGAS REPYAATKSA SEAIAGAHQR AGAPVVISRP PALLGPHDPK
TGDQTRRLRD TVRGIMPVWP SGALQIGDVR DTARLHTTLL EGRAGGAHFG PGRLITTPEY
VAEARRASGR PLPTVFLPAA LVTPVGRLVD LLQPFWPWHI PAAHGAITTA AASVSVAPAA
STLGLTPRPF ADTVADTLDW LVATDQLHPR TRTPVT
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