| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4076 |
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| Symbol | |
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| ID | 8328269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 4786835 |
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| End bp | 4788385 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644944541 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_003101778 |
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| Protein GI | 256378118 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00359507 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGGGTGC TGGACGACTA CGACGACATC GTGATCGGTG CCGGGAGCGC GGGGGTTCCG
GTCGCCGTCC GGCTCAGCGA GGACGGGCAG CGGCGGGTGC TGCTGGTCGA GGCCGGGCCG
GACTACCCCG GTGAGCTTCC CGCTGACCTG GCCGACGGGA ACCGGATGTC GCTGGTGGAC
CACGACTGGC GGTTCACCGC CGGGATGCTG GCCGATCGGC CCACCCGGTA CTTCCAGGGG
AAGGTGGTCG GCGGCTCCTC CTCGGTGGGG AACACCATCG CCATCCGGGG GATGCCGGGG
GACTTCGACG GGTGGGCCGC GTCGGGGAAC CGGGGATGGG GGTGGGCGGA GCTGCTGCCG
CACTTCCTGG CCGTCGAGGA CGACCTGGAC TTCGCCGGGG AGTTCCACGG CAAGGGCGGG
CCGGTGCCGA TCCGGCGGTG GCGGGCCGAG GAGCTGACCG CGGCGCAGAG CGCGTTCCAG
CGGGGGTGCC TGGCCGCCGG GTTCGCGGAC GTCGCCGATC ACAACGACCC GGGGTCGACC
GGGGTGGGGC CCGCGCCGTC CAACCGGCGG GGTGGGCGGT TGCGGGTGTC GACGGCCACC
GGGTACCTCA CGCCCGAGGT GCGGGCGCGG GAGAACCTGA CCCTGGTGTC GGGCGTCGTG
GTGAACCGGG TGCTGGTCTC GGACCAGCGG GTCGTCGGCG TCGAACTGGT GGACGGGGAG
TCGTCCGCGC GGGAGGTGCG GGCTCGGCGG GTGGTGCTGT CCGCCGGGGC CGTGGGGACG
CCCGCGATCC TGCTGCGCTC GGGGATCGGG CCCGCCGAGG ACCTGCGGGC GCTGGGGATC
GACGTGCGGG TGGACCTGCC GGGTGTCGGG GCGGGGTTGA GCGAGCAGGC CCGGACCGGG
GTGTTCATGG TGCCCAAGCC GGGTGCGGAG AACTTCGGGG CGGCGGTCGG GCAGATCGTG
GTGCGGGCCG GGGCGCGGAG CACCGGGCGG GCCAACGACA TGTACTACGC GATGGTCAAC
CACTTCGACC TGGCGACCCA GTTCCCGCAC CTGCGGGCCG CCGCCGGGGC CGGGCGGGTG
TTCACCGTGC TGGTCGTGGC GCGGGAGCCC CTGGCTCGGG GGCGGGTGCG GTTGGCGTCG
GTCGACCCCC GACGGGCCCC GGAGATCGAC TTGAACTTCC TGTCGTCCGA GCACGACCAC
CGGTTGCTCG CGGACGGGCT GCGGGTCGGG TGGGAGCTGG CGCAGACGCC GGAGATCCGG
GACCTGGCCG AGCGGGTGGT GCTGCTCGAC GACGCGCTCG TGGACTCGGA CGAGGCGGTG
CGGGACTACG TGACCGCGAC CGTGGACCCG GCCTACAACC CGGTGGGCAC GGCGCGGATG
GGGCCGGACG GGGACCCGAT GGCCGTGGTG GACGAGCGGT GCGCGGTGCG CGGGGTGGAC
GGGCTGCACG TCGCGGACGC CTCGGTGATG CCCGCCATGG TGCGGGCGAA CATCAACCTG
TCGGTGATCG CGGTTGGCGA GCGGGTCGCC GAGCTGCTGC GGGAAGCGTG A
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| Protein sequence | MGVLDDYDDI VIGAGSAGVP VAVRLSEDGQ RRVLLVEAGP DYPGELPADL ADGNRMSLVD
HDWRFTAGML ADRPTRYFQG KVVGGSSSVG NTIAIRGMPG DFDGWAASGN RGWGWAELLP
HFLAVEDDLD FAGEFHGKGG PVPIRRWRAE ELTAAQSAFQ RGCLAAGFAD VADHNDPGST
GVGPAPSNRR GGRLRVSTAT GYLTPEVRAR ENLTLVSGVV VNRVLVSDQR VVGVELVDGE
SSAREVRARR VVLSAGAVGT PAILLRSGIG PAEDLRALGI DVRVDLPGVG AGLSEQARTG
VFMVPKPGAE NFGAAVGQIV VRAGARSTGR ANDMYYAMVN HFDLATQFPH LRAAAGAGRV
FTVLVVAREP LARGRVRLAS VDPRRAPEID LNFLSSEHDH RLLADGLRVG WELAQTPEIR
DLAERVVLLD DALVDSDEAV RDYVTATVDP AYNPVGTARM GPDGDPMAVV DERCAVRGVD
GLHVADASVM PAMVRANINL SVIAVGERVA ELLREA
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