| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4075 |
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| Symbol | |
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| ID | 8328268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 4785299 |
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| End bp | 4786501 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644944540 |
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| Product | cysteine desulfurase family protein |
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| Protein accession | YP_003101777 |
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| Protein GI | 256378117 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01976] cysteine desulfurase family protein, VC1184 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000488918 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCCTTCG ACGTCCACGC GTTCCGCGCG CACTTCCCGT CCCTGACCTC CGGGGTCGCC
CACTTCGACG GCCCCGGCGG CACCCAGACC CCGCGCCCCG TCGCCGAGGC CATCACCGCC
ACCATGACCG GCCCGCTGTC GCTGCGCGGG TCCGAGCTGC CCTCCGAGCG CAACGCCGAG
CAGGTGGTCG CCGCCTTCCG CTCCGCCTAC GCCGACTTCC TGAACGTCCC CGAGCGCGGC
GTGGTCCACG GCCGCAGCTC CACCCAGCTC ACCTACGACT TCTCCCACCA CCTGTCCCGC
TCCTGGGGCC CCGGCGACGA GGTCGTCGTG ACCAGGCTCG ACCACGACGC CAACGTCCGC
CCGTGGGCGC AGGCCGCCGA ACGCGCGGGT GCGACGGTCC GCTGGCTCGA CCTCGACCCG
GAGACCGCCC TGCTCCGCGT GGACGAGCTG GACCGCGCCA TCACCGACCG CACCAGGCTG
GTCGCGGTCA CCGCGGCCTC GAACCTGCTG GGCACCCGCC CGCCGGTGCG CGCCATCGCC
GACCGGGCGC ACGAGGTCGG CGCGCTGGTG CACGTCGACG CCGTCCACCA CGCCGCCCAC
GGACTGGTGG ACGCCACCGC GCTGGGCGCG GACTTCGTGG TCTGCTCGCC CTACAAGTTC
TTCGGCCCGC ACTGCGGCGT CCTCGGCGCG GACCCGGCGC TGCTGGAGAC CCTGAGCCCG
GACAAGCTGG TCCCGTCCAC GAACGCCGTC CCCGAGCGCT TCGAGTTCGG CACCCTGCCC
TTCGAGTCCC TGGCGGGCGC GACCGCCGCC GTCGACTTCC TGGCCGCGAT CGCCCCCGCG
CCCACCCGCC GCGCGAGCCT GGAAGCCGCC TACCGCGCCG TGGCCGAGCA CGAGCACGCC
CTGCTCACCC GCCTCACCGA GGGCCTGGCG GCGCTGGGCG ACCGCGTGGT GAACCGCTCC
CGCGCCACCG ACCGCACCCC GACGACCCTC CTGGAACTCC CCGGCCACGA CGCCCGAGCC
GCCTACCGCT TCCTGGCGAG CCGCGACGTC CTGGCCCCGG CAGGCGCCTT CTACGCCCAC
GAGGCGGCGC TGGCGCTGGA CCTCCCGGAG AGCGGCGGCC TGCGGATCGG CATCGCCCCG
TACACCACCG AGGACGAGAT CGACCGCCTC CTCGACGGCC TGGCGGCCTT CACCACCGCC
TGA
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| Protein sequence | MSFDVHAFRA HFPSLTSGVA HFDGPGGTQT PRPVAEAITA TMTGPLSLRG SELPSERNAE
QVVAAFRSAY ADFLNVPERG VVHGRSSTQL TYDFSHHLSR SWGPGDEVVV TRLDHDANVR
PWAQAAERAG ATVRWLDLDP ETALLRVDEL DRAITDRTRL VAVTAASNLL GTRPPVRAIA
DRAHEVGALV HVDAVHHAAH GLVDATALGA DFVVCSPYKF FGPHCGVLGA DPALLETLSP
DKLVPSTNAV PERFEFGTLP FESLAGATAA VDFLAAIAPA PTRRASLEAA YRAVAEHEHA
LLTRLTEGLA ALGDRVVNRS RATDRTPTTL LELPGHDARA AYRFLASRDV LAPAGAFYAH
EAALALDLPE SGGLRIGIAP YTTEDEIDRL LDGLAAFTTA
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