Gene Amir_4056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4056 
Symbol 
ID8328249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp4767474 
End bp4768103 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content76% 
IMG OID644944526 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003101763 
Protein GI256378103 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.910923 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCCTGG ACGCCGCGGT GGCGGTGGCC GACGCGGAGG GTGTCTCGGC GGTCTCGATG 
CGCAGCGTCG CCCGCCGGCT CGGCGTGGAC GCCAAGAGCC TCTACAACCA CGTCGAGGGC 
AAGGGCGGGC TGCTCGACGC GCTCGCCGAG CACGTCCTGC GGGGCATCCG GCTTCCGGAG 
CCGACAGGTG TGCCTGCGGA CGACCTGCGG GCCATCGCGG TCGAGTTCCG CAGGGGCGCG 
CTCGCCCATC CGGGCGTGGC CGCGCTCGTG CTGACCCGCC AGTTGGCCTC GGCGGCCGGG 
CTCGCGCCGA TCGAGGCGGC GCTGTCGGTG CTGCTGCGGG CGGGGATCGA GCCGGAGGAG 
GCCGTCCACC TGCTGCGGGC GCTGCTGGCG GCCGTGGTCG GCACGCTGCT GCGCGAGGTG 
TCCGCGGGGC CCGAGCTGGG CACGGCGGAT TCGGTGGGCA TCGCCCGCAG GCGTGCCGTG 
CTGGCCTCGT CGGGGCTGCC GGGGCTGGTC GCCGCCGCGC CGCACCTGGC CCGGTGCGAC 
CACGACCGGG AGTTCGACTA CACCGTCGAG CTGCTGGTGG GGGCGGTCAG CGCGCGGCTG 
CCGGAGCGGT CGAGCACGTG TGACCGTTGA
 
Protein sequence
MILDAAVAVA DAEGVSAVSM RSVARRLGVD AKSLYNHVEG KGGLLDALAE HVLRGIRLPE 
PTGVPADDLR AIAVEFRRGA LAHPGVAALV LTRQLASAAG LAPIEAALSV LLRAGIEPEE 
AVHLLRALLA AVVGTLLREV SAGPELGTAD SVGIARRRAV LASSGLPGLV AAAPHLARCD 
HDREFDYTVE LLVGAVSARL PERSSTCDR