| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4048 |
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| Symbol | |
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| ID | 8328241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 4759524 |
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| End bp | 4762004 |
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| Gene Length | 2481 bp |
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| Protein Length | 826 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 644944518 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003101755 |
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| Protein GI | 256378095 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.078752 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCAGGC GGGTCGACGT CGGCGTGCTG CGCACCCAGC TCGCCGGGAT CGTCCGCGCT
CCCCTCCGGC TGGTGCTCAC CGGGTTGCCG GTGCTGGTCG CGGCGTTCTT CGCCTGCGGC
GCGGCGCTGG GGCAGGTCGT CGCCGAGCGG GCCGTGCTGG ACGGGCTCGG CGGCACGCCC
GCCGCCGTCG ACCTGGTGGT CGACGGCGGG CCGCTCACCG GAGCCGGGGT CGACCGGGTG
CGGGCCACGC CCGGAGTCGC CGAGGTCCAG CCGAGGGTGA GCGCGGGGGC GGTGCTCGCC
GACGCGGCCG ACCGGTACCT CGGGCTCGAA GCCGATCCGG GGGACGGTCC GCTGTCGCTG
GCGCGGGTCG TGGACGGGCG CTATCCCGGT GCGGCCGACG AGATCGCGGT CAACGAGGTC
GCCGCGGCGG GCTACGGCCT CAAACCGGGG GACCGGACGA CCCTCGTGCT CCCGGTCGGC
GAGGGCGGGC AGCGCGACGC CGAGGTGCTG GTCACCGGGG TGGTCCGCGT GGTCGGGGAG
AAGCTGGAGG CCGCGTACGC GCCCACCGAA GTCATCACGT CGCTGGTGGA CCTGCCCGCC
GAGGACGGGT GGTGTTCGCG GCTCGACGTG CGGCTCGCGG ACGGGGCCGA TCCCGGCGCG
CTCATGGCGG AACTCGCCGC CGTGACGGGG GCGGACGGGG AACCGGTGCG CGTCGAGACC
GGGGACGCGG TGCGGCTGGC CGAGGCCCGC GCCGCGACCG GTGACGTGGA CGACCTGTTC
GCGGGCATCG CGCTGTTCGT GGGCATCTCG GTGGTGGCCG CCGCGCTGGT GGCCGCCTCC
GCGTTCCGCG TGGTGTTCTC GCAGCGGCTC AAGCAGTTGG CGCTGCTGCG GGTCGTCGGC
GCGCACCGGG GGCAGCTGGT GCGGGCGCTG GTCGTCGAAG GCGTGGTCGT CGGCCTGGTC
GCCGGGGGAG CGGGCGTCGC GACGGCCGTG GGGCTGGTGC GGTTGCTGCC GCTGGTGAGC
GACCTGCCGA CGCCGGAGAC GCCGGTGGCC TGGGTGCTCG GCGTGGTCGT GGGCGCGGTG
GCCGTGACCG TGCTCTCGGT GCTGGGGCCG GCGGTCTCCG CCTCCCGCGT GTCACCGCTG
CAAGCGCTGC GCGGGGCCGA CGTCGTGCCC GCCGAGCGTG CTCTCGGACC GCTGCGGCTG
GCCGCCGGGG TGCTCCTCGC CGCGCTCGCG GCCGGGGTGG TCGTGCTGCT GGCGCGCGAG
CTGCCCGGAC CGGGGAGCAC CGGGTACGAC CGGGACGCCG GGCTGGTCGC GGTCGCGGCG
GTGGCGGTGC TGCTGTTCCT GGCCCTGCTG CTGCTCGGAC CGCTCGTGGT GCGCCCGGTG
CTGGCCGCCG TGGGCCCCGT GGCGCGGCGG CTCGGGCCGG TGGGGCGGCT GGCCGTGAGC
GGGGTCGGTG GCGCGTCGCG CCGGGCCGCC GCCGTGTCGC TGGTGGTGGC GCTCGGGGTG
GCGCTGGTCA GCAGCGCGCT GGTCGGCCGG GCCGGGCTCG CCGGGTACGC CGAGCGCGAG
CTGGGGTTGA GCGCGCCCGC CGACCTGCGG GTGACCGGGG CGTCCGAGGA GACCGCGCGC
CGGGTGGCCG GGCTGCCCGA GGTGGTCGAG TCGACCGACT ACCGCACCGG CGAGCTGACC
GCGGGCAACC GCCACCACCA GTTCGCCGAC CTCGACCTCG GGGCGCTGGA GGCGTTGCGG
GACAACGCCG TCGCAGACAG CGGGAGCCTC GCCGACCTGC GCGCCGGGCG GATCGTCGTG
GGTGGGCGGA CCGCTCGGTC GCTCGGCGTC ACGGCCGGGG ACGCCGTGCG CGGCGCCGTC
GACGGGCGCG AGGTGACCTG GGTGGTGGCG GCGACGCTGA CCGGGACCGA CCCGGCGGGC
GTCGGGATCG TCGTGCCGCG CGGACAGGCG CCCGGTGGTG AGATCACCGT GCTGGTCTCG
GGAGACCCCG TCGTGGTGGA GCGGGCCGTG CGGGCGGCGG TCGGCGACGG GGGCGAGGTC
ACCGCGACGC GGCGCGACCA GGGGGACCTG CGGGAGGTGG TCGACCTGCT GGCGCTCGTC
GGGCTGGGCC TGATCGGGTT GACCGTGCTG GTCGCCGTGG TCGGGGTCGG CGCCACCACG
GGGCTGGGCG TGGTCGAGCG CACCCGCGAG ATCGGCGTGC TGCGGGCGCT GGGCATGGGA
CCGGGTGGGG TGCGGTCGGT GGTCGTCGTC GAGGCCGGGA TCCACGGGGT GCTCGGCGCG
GTGCTCGGGC TCGCGGTGGG GGTGCCGTGC GCGCTCCTCG GGCTCCTGGC GCTGGACCTG
GGCGTGCCCC TGGTCGTCCC GGCGCCGCCG CTGGCGGGCG CGGTGGTCGG GGTGGTCGCG
CTGACCGCGC TCGCCGGGTG GGTCGGGGCG CGGCGCGCGG TCCGGGTCAG CCCGGTCGCG
GCGCTGCGAG CGGACTCCTG A
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| Protein sequence | MSRRVDVGVL RTQLAGIVRA PLRLVLTGLP VLVAAFFACG AALGQVVAER AVLDGLGGTP
AAVDLVVDGG PLTGAGVDRV RATPGVAEVQ PRVSAGAVLA DAADRYLGLE ADPGDGPLSL
ARVVDGRYPG AADEIAVNEV AAAGYGLKPG DRTTLVLPVG EGGQRDAEVL VTGVVRVVGE
KLEAAYAPTE VITSLVDLPA EDGWCSRLDV RLADGADPGA LMAELAAVTG ADGEPVRVET
GDAVRLAEAR AATGDVDDLF AGIALFVGIS VVAAALVAAS AFRVVFSQRL KQLALLRVVG
AHRGQLVRAL VVEGVVVGLV AGGAGVATAV GLVRLLPLVS DLPTPETPVA WVLGVVVGAV
AVTVLSVLGP AVSASRVSPL QALRGADVVP AERALGPLRL AAGVLLAALA AGVVVLLARE
LPGPGSTGYD RDAGLVAVAA VAVLLFLALL LLGPLVVRPV LAAVGPVARR LGPVGRLAVS
GVGGASRRAA AVSLVVALGV ALVSSALVGR AGLAGYAERE LGLSAPADLR VTGASEETAR
RVAGLPEVVE STDYRTGELT AGNRHHQFAD LDLGALEALR DNAVADSGSL ADLRAGRIVV
GGRTARSLGV TAGDAVRGAV DGREVTWVVA ATLTGTDPAG VGIVVPRGQA PGGEITVLVS
GDPVVVERAV RAAVGDGGEV TATRRDQGDL REVVDLLALV GLGLIGLTVL VAVVGVGATT
GLGVVERTRE IGVLRALGMG PGGVRSVVVV EAGIHGVLGA VLGLAVGVPC ALLGLLALDL
GVPLVVPAPP LAGAVVGVVA LTALAGWVGA RRAVRVSPVA ALRADS
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