| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4012 |
|---|
| Symbol | |
|---|
| ID | 8328205 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 4693917 |
|---|
| End bp | 4695188 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 644944484 |
|---|
| Product | heat domain containing protein |
|---|
| Protein accession | YP_003101721 |
|---|
| Protein GI | 256378061 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4335] DNA alkylation repair enzyme |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTTCCG TGCCCACAGC CGATGAGCTC CTGAGCCCCA CGACCGTCCT CGACCTGGCC
GAGCGCCTGC GCCTGGCCGG GACGCCCTGC CCGCGCGTGG CCGGGGTCGC GGGCGCGCTG
GACGGCGTCG CGCTGGCGGG GCGGACCAGG CTGGTCGCGG ACGCGGTGCT GGCCGACCTG
CCGGAGGACT GGTCGGCGTT CGAGGCGGTG CTGCTGGCGG CGCTGACCGA TCCGGGCTTC
GGCGGCTGGG CGGTGTGGCC GCTGTCCGAG GCGCTGGCGG CGCGCGCCGC GTCGACCGGC
CGCGTCCGGG AGGGCTTGGC CGTGCTGGCG GCCCTGACCG GGCGGCTGAC CGGCGAGTTC
GCGCTGCGCA CGTTCCTGCT GGCCGACCTG GGCACGACCC TGGAGGTGGC GCTGGCGTGG
ACGGCGTCGC CGGACGAGCA CGTGCGGCGG CTGGCCAGCG AGGGCACCCG GCCGTTCCTG
CCGTGGGGCA GACGGGTGCC GGGGCTGACG GCGGAGCCGG GGCGGGCGCT GCCGGTCCTG
GAGGCGCTGC GCGCGGACGA GTCGGAGTAC GTGCGCCGCT CGGTGGCCAA CCACCTGAAC
GACGTGAGCA GGCTGGACCC GGCGCTGGTG GTCGACGTGG CCGGGCGCTG GCTGGCCGCC
CCGGCCCCGA CGACGCCCCG GCTGGTGCGG CACGCGCTGC GCACCCTGGT CAAGCGCGGT
GATCCGGGGG CGCTGGGGCT GCTGGGGTAC GGGGCGGCGG AGGTCGAGGT GGGCGGCCCG
GTGCTGACCA GGGCGGAGGT GCGGTTCGGG GGCGAGTTGG AGTTCACGGC GGAGGTGGTG
AACCGGGGCC GGGAGGCGGC GCGGCTGGCG ATCGACTACG CGGTGCACTA CGTGAAGGCG
GACGGTTCGA GGACGCCGAA GGTGTTCAAG CTGACCACGC GCGTGCTGGA GCCGGGCGAA
CGCGCGCTGC TGACCAAGCG CCACCCGTTC CGCGAGATCA CCACCCGACG GCACCACGCG
GGCACGCACG CGGTGGAGCT CCAGGTCAAC GGCGTCAGGC ACGGGCTGAC CGAGTTCACC
CTGACGGGGC TGCCCGGACC ACGCGCGGTG GTGAGGGGTG CGGCGCCGGG CGCAACGGCG
GAGGCAGCGG CGCCGAGCGC CACACCGGAC ACGACCGGAC CAGGAACGGG ACCGGGTGCG
GGTGCGGGTG CGGGAACGGG CGCGGGCGCG GGTGTGGGTG CGGGGCTGGC TGCGGAGGTG
ACGCGCACCT GA
|
|---|
| Protein sequence | MGSVPTADEL LSPTTVLDLA ERLRLAGTPC PRVAGVAGAL DGVALAGRTR LVADAVLADL
PEDWSAFEAV LLAALTDPGF GGWAVWPLSE ALAARAASTG RVREGLAVLA ALTGRLTGEF
ALRTFLLADL GTTLEVALAW TASPDEHVRR LASEGTRPFL PWGRRVPGLT AEPGRALPVL
EALRADESEY VRRSVANHLN DVSRLDPALV VDVAGRWLAA PAPTTPRLVR HALRTLVKRG
DPGALGLLGY GAAEVEVGGP VLTRAEVRFG GELEFTAEVV NRGREAARLA IDYAVHYVKA
DGSRTPKVFK LTTRVLEPGE RALLTKRHPF REITTRRHHA GTHAVELQVN GVRHGLTEFT
LTGLPGPRAV VRGAAPGATA EAAAPSATPD TTGPGTGPGA GAGAGTGAGA GVGAGLAAEV
TRT
|
|---|
| |