Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_3979 |
Symbol | |
ID | 8328172 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 4662650 |
End bp | 4663261 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644944453 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003101690 |
Protein GI | 256378030 |
COG category | [S] Function unknown |
COG ID | [COG3226] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGACGAGG ACGACGCGGG GACCGGTGCC CGGACACCCG CGCGGGGGGC GGGTTCGCGC AGGCCCGACC CCGGCAGGCG GGACCGGATC ATCGACGCCT GCCTGGACGT GATCGCCGAG GTCGGGGTGG ACGGGGCCTC GCACCGGGGC ATCGCCGCCG CGGCCGGGGT GCCGCTGGGG TCGATGACCT ACCACTTCGA CGGGATGCGG CAGCTGCTGC GCGAGGCGTT CGGCCGGTTC GCGGGGGCCG TGGCCGCCGG GTTCGAGGCG CGCATGGCCG CCGCCGCGAA CGCCGAGGAG GCGGCGGCGG CGGTCGTGGA GATCATCACC GTGGACACCC TGAGCACCCA GCGGGACCTG GTGCTCACGC ACGAGCTGTA CACCCTGGCC GCGCGCGACC CGGAGTGCCG GGACGTCACC AACGCGTGGA TGGCCGCGAG CAGGCGCGCG CTGGAGCGGC ACTTCGACCC GCTCACGGCC AGGCTGCTCG ACGCCCTGAT CGAGGGAATG TCGATCCACC GCGCGCTGGA CACCGAGCCG CACGACCGGG CCGCCGCCGT GGCCGCCGTC GAGCGGATCA CCGGGCGGAC CAGCGGAGGA ACCGCCGGGT AG
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Protein sequence | MDEDDAGTGA RTPARGAGSR RPDPGRRDRI IDACLDVIAE VGVDGASHRG IAAAAGVPLG SMTYHFDGMR QLLREAFGRF AGAVAAGFEA RMAAAANAEE AAAAVVEIIT VDTLSTQRDL VLTHELYTLA ARDPECRDVT NAWMAASRRA LERHFDPLTA RLLDALIEGM SIHRALDTEP HDRAAAVAAV ERITGRTSGG TAG
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