Gene Amir_3960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3960 
Symbol 
ID8328153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp4643730 
End bp4644617 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content77% 
IMG OID644944436 
Producthypothetical protein 
Protein accessionYP_003101673 
Protein GI256378013 
COG category[V] Defense mechanisms 
COG ID[COG2367] Beta-lactamase class A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTGGCGG AGCTGCGCCG GGAGCTGGCG GACGCCGGGT TGGACGGCTC GTTCCTGGTG 
CGGGACCTGC GCACCGGGCA GGAGATCGCG ATCGAACCGG ACGTCGAGTG GCCGATGGCG
TCCCTGGTGA AGGTGCCGCT GGCCGTGGCG ACCCTGGAGC GGGTGCGGCG CGGCGAGCTG
GACGGCGCGA CCAGGGTCGA GGTGCGCCCG GCTCCGGACG CGCCACCCGG CTCGCCCGGC
CTGTCCTGGT TCCGCCACCC GGTGGAGGTG GCGGTGGACG ACCTGCTGTA CCTGGGCGTG
GCGATCAGCG ACAGCCGGGC CGCCGGCGCG CTGTTCGCCC TCACCCCGCC GCCGCGGGTG
AACGCCCTGC TGCGCGAGCT GGGCGTGCGC GGGCTGGCCG TGCGGCACGA CCTGGACCCG
CTGACCGACA CCCCGGTCGA GCGCTTCGAA CCGGCCGAGG TGCACCTGGC GCACTCGCTG
GCGGCGACCG CGGGCACGCC CGGCCGGGGG CACCCGGTGG CGCAGCTGGA CGTGACGCGC
GCGAACGCCG GGTCGGCGCG GGCCTTCGCC GACCTGCTCC AGGCGCTGTG GCGGCCGTCG
GGGGTCCCGG AGGAGGTGGC GGCGCGGGTG CGGGAGCTGA TGTCGCTGAA CGTGCTGCGG
CAGCGGCTGG CCCCGGACTT CACCTCGGAC GCGACCCGGT GGTCGTCCAA GACCGGCACG
CTGCTGACGC TGCGCCACGA GGTGGGCGTG GTGGAGCACG ACGACGGGCA GGCGTTCGCG
GTGGCCGCCC TGACCGGCTC GACCGTGCCC GCCGCCGCGC AACCGGGGGC CGAGGCGGTG
ATGGGCCGGG TGGCGCGCAG GCTGCGGGAC TGCCTGCGCC TGCGCTGA
 
Protein sequence
MVAELRRELA DAGLDGSFLV RDLRTGQEIA IEPDVEWPMA SLVKVPLAVA TLERVRRGEL 
DGATRVEVRP APDAPPGSPG LSWFRHPVEV AVDDLLYLGV AISDSRAAGA LFALTPPPRV
NALLRELGVR GLAVRHDLDP LTDTPVERFE PAEVHLAHSL AATAGTPGRG HPVAQLDVTR
ANAGSARAFA DLLQALWRPS GVPEEVAARV RELMSLNVLR QRLAPDFTSD ATRWSSKTGT
LLTLRHEVGV VEHDDGQAFA VAALTGSTVP AAAQPGAEAV MGRVARRLRD CLRLR