Gene Amir_3939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3939 
Symbol 
ID8328132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp4620663 
End bp4621283 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content72% 
IMG OID644944415 
Productbifunctional deaminase-reductase domain protein 
Protein accessionYP_003101652 
Protein GI256377992 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0262] Dihydrofolate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.175221 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGGCA CGGTGTTCTT CAGCGTGTCG ATGTCCCTGG ACGGCTTCAT CGCCCCCGAG 
AGCGCCGAGG AGCTGATGGG GCGGCAGTGG ATGGAGCTGC AGGGCTGGGC CTTCCGGCAG 
CGGTTCTTCC GGGAGAACCT CAAGCTCGGC TCCGGCGGCG CGGAGGGGCG GGACAACGAG 
ATCGTCCGGG CGACGTTCGA GCGCACCGGC GCGAGCGTGA TGGGCAAGCG CATGTTCGAC 
GCGGGCGAGC ACGCCTGGCC CGACGACCCG CCGTTCCACA CCCCGGTGTT CGTCGTGACC 
CACGAGCGCC GCGCCCCCTG GGAGCGCCGG GGCGGCACCA CGTTCCACTT CGTGAACGAC 
GGCGTCGAGT CCGCGCTGGC CCAGGCGCGT GAGGCCGCCG GTGACCGGGA CGTGCGCGTG 
TCGGGTGGCG GCGAGACGAT CCTGCGCCAC CTGAACGCCG GACTGGTGGA CGAGTTCACC 
CTCGCCCTGT CCCCGGTGCT GTTCGGCGCG GGCATCCGCC TGTTCGAGGG CGTGGACGCG 
TCCAGGGTGG CCCTGGACCA GGTCCGCGCC GAACCCGGCG AGGGGGTGAC CCACCTGACC 
TACGCCGTCA GGCGGAGGTA G
 
Protein sequence
MAGTVFFSVS MSLDGFIAPE SAEELMGRQW MELQGWAFRQ RFFRENLKLG SGGAEGRDNE 
IVRATFERTG ASVMGKRMFD AGEHAWPDDP PFHTPVFVVT HERRAPWERR GGTTFHFVND 
GVESALAQAR EAAGDRDVRV SGGGETILRH LNAGLVDEFT LALSPVLFGA GIRLFEGVDA 
SRVALDQVRA EPGEGVTHLT YAVRRR