Gene Amir_3930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3930 
Symbol 
ID8328123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp4612099 
End bp4613166 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content79% 
IMG OID644944408 
ProductFAD dependent oxidoreductase 
Protein accessionYP_003101645 
Protein GI256377985 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGCTC GGACCGACGT CGTCGTCGTG GGCCTGGGCG TCATGGGCAG CGCGGCCACC 
GCGGCGCTGG CCGCCTCGGG CCGGAGCGTG ATCGGGCTGG ACGCCCGCTC CCCCGCCCAC
CCGGACAGCG CCTCGACGGG CGAGTCCAGG ATGCTGCGCC GCGCCTACCC GAGCCACCCC
GACCTCGGCC CGCTGACCGG ACCGGCGCGC GAGGCGTGGC TGAGCCTGGA ACGCCGCGCG
GGCGCGCCGC TGCTGCTGCG GACCGGCGGC CTGCTGGTCG ACCGGTCCGG CGGGGCGGCG
CGGTCGGCGG CGGTCGACGC GGCCCGGCGC GACGGCGTGC CGCACCGCGT GCTCGACGCG
CACGAGCTGC GCCGACGCTG CCCCGCGCTG CGCTTCGCCG ACGACGACAC CGGTTTCCTG
GACGAGGAAG CCGGACTGCT GCTGGCCGAG CGGTGCGTGC TGGCGCTGCA GCGCGAGGCC
GTGGCCTCGG GCGCCCGGCT GCGGTTCGGC GAGCCCGTCG GCCTGGCGGA CCTGCTGGAC
CGGTGGGCCG ACCGGCGCGA GGTGGCGGGC GTGCGGGCCG ACCGGCTGGT GCTCGCGCTG
GGCGCGTGGC ACGGCGCGGC CACCGCGTGG CCACCGCTGC GGGTCGAGCG CACCACCTCG
TTCTGGTTCG ACCCCGGCGG GCGGGACCTG GGCCCCGACG CGCTGCCGTT CGTGGAGTGG
GTCGACGGGG ACGGCGAGTT CTGCCTGCTG CCCGCCCTGC CCGGCGGGGT GAAGGCCAAG
GCGCACCACA CCGGGGAACC CGACCTCCCG CCCGCACGAC CGGTCGGCGC GGACGAGGTG
GCGCGGGCGC GCACCCGACT GCGCGGGCTC ACCGGCCTGG ACCTGGAACC GCGCGCCGCC
ACCGCGTCCT GCTACGCCAA CACCGGGGAC GGCGCGCTCG TCGTGGCCGC GCACCCAGGG
GCGCCGGACG TCGTCGTGGT GTCGGCCTGC TCGGGCCACG GCTTCAAGTT CGCCCCGGTC
CTGGCCGACC GGGTGGTCAC CACCATCGGG GAGAGGAGCG CGGCGTGA
 
Protein sequence
MTARTDVVVV GLGVMGSAAT AALAASGRSV IGLDARSPAH PDSASTGESR MLRRAYPSHP 
DLGPLTGPAR EAWLSLERRA GAPLLLRTGG LLVDRSGGAA RSAAVDAARR DGVPHRVLDA
HELRRRCPAL RFADDDTGFL DEEAGLLLAE RCVLALQREA VASGARLRFG EPVGLADLLD
RWADRREVAG VRADRLVLAL GAWHGAATAW PPLRVERTTS FWFDPGGRDL GPDALPFVEW
VDGDGEFCLL PALPGGVKAK AHHTGEPDLP PARPVGADEV ARARTRLRGL TGLDLEPRAA
TASCYANTGD GALVVAAHPG APDVVVVSAC SGHGFKFAPV LADRVVTTIG ERSAA