Gene Amir_3923 details

Gene Information

• Locus tag: Amir_3923
• ID: 8328116
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 4602815
• End bp: 4604995
• Gene Length: 2181 bp
• Protein Length: 726 aa
• Translation table: 11
• GC content: 76%
• IMG OID: 644944403
• Product: hypothetical protein
• Protein accession: YP_003101640
• Protein GI: 256377980

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTCCGTGT CGGAGTCAGA GCACCGCGCC GCGTACCTGA GGGCGCTGGA CCCGGAGTGG 
CCGCGCCCGC GCGAGGACGA GCTGCCGCGC CTGCTCGCCG CGCTGGCCGA GGCGCCCGCC 
GCCGAGGCCC TCGCCACCGA GGCCCTCGCC ACCGGGGAGG CCGACGCCGA GCTGACCGGG 
CCGGACGAGC TGGTGGCGGG CGTGCGCGAG TGGAGCGCGG CGGAAGCCCT GGTGTTCCGG 
GAGATCCTCG CCGGGCCGTC CACCGGGTCG GCGCAGGCGC GGGTGCTGGC CAACTGCGCG 
CCGCTGGCGC TGTCGGCGGG CGCGTGGTTG CAGTGGCTGC CCAGCGCGGG TGACGCCGAG 
AGCGAGCTGA CGCTGCGCGT GCTGGCGCTG TACGCCTCGG ACGTGGGCGT CGGCTACCCG 
CACGCCGATC GCGGCAGCGA CTACCGGGCG CTGCTGCGGG CGCACCGGGT CCGCGACGAG 
ACGCCCGGCC CCCGGCTGGC GGGCAGCGAC CGGATCGAGA GCGCCGCCTT CCGGTTCCCC 
GCGCTGCTGC TGGCGATGAG CCGCCTGCCC CGGCGGTTCC GGCCCGAGCT GCTGGGCGCG 
GACCTGTGCC TGCGCGCGGT CGGCGTGCTG CCGCCGCTGG CCGGTGCGGG CGCGGACGCG 
CTCGGCGTTC CCCTGGGGCT GCTGGACCTG GGCGCGGCCA GGTGGGACGA GCCGCGTCCC 
GCGCTGGAGC TGTCCCTGGC GGCGGCGGAG GCCGTGCTGG CGGCCGGTGA CGGCGCGCGG 
CTGCGGCACG GGTTCGCCTG GGCCTGGCAC GAGCTGCGGC GGTGGTGCGC CGGGCTGGCG 
CGGGAGGTCC GCCTGGCCAC CCACCCGGAC TACGACGTGT GGCGGCTGAT CTGGACCAGG 
GCGAGGCAGG CCGCCGTCTA CCACGGCGGG TTCCCCCTGG AGGGCCGCCC GCTCGCGCAC 
TGGTTCGCCG ACGTGGACGC CGGTCCAGGC GCGTTCCTGG ACGCGCTGGC GCGCAGCGCG 
CTGGTCCGCC CCGGACAGCC GGACCGGAGC CCGCTGCTGA CCGGGCTGAT CGGCGAGAAG 
GGGCGGATGT TCCGCGTCTT CACCGAGGAC GAGGTCGCCG TGCTGCGCCG CTGGATCGCC 
CAACTGCCCC CGCCGGGCGC CGAGGTGGGC GCGGCGGGGA GCGTGCGGGA GGAGCTGCAC 
CGGGCGCAGC GGTCGTGGAG CCGCAACGGC GACCTGCCCG AGGCCGACCA CCGGTCCACA 
GTGGACCAGG GTGGCGACTT CGGCTCGCCG TCCCCGCGCG CGGCCTACCG GACCCTGCTG 
GGCCGCGAGG ACCCGCCGGG CCTGCGCCGC TTCGCGCACG ACTACGCCAC CCGGTGGCTC 
GCCCGCTCCC GCTACGGCCT GGACCGCGCG CCGGGGCAGC TGCCGCCGCG CTGGGACCCG 
GAGACCGGGC TGCGCGCGTG GCTGGCCGCC GAGCACGAGC GGCACAGCTC CGAGCACGAG 
GCGGGACGGC CGCGCGTCCC CGACCGGGAG GCGCTGGTCG AGTCGACCCT CCAGCTCGCG 
CCGCTGATCA TGATCGACGG CGGGTGGCTC CAGGGCTTCA CCGACCACCA GCACGCGTCC 
TCGGCCTCGG GCCACTTCCT GTTCCAGACC TACTGGGACG AGCTGGGCAA CGGCGTGCGG 
GAGCTGAACC ACCCCGGGAT CTACCGCGAC CTGCTGCGCG AGATGGGCGT GGACCTGCCG 
CCGACCGACT CCCCCGAGTT CACCGCCTGG CCCGGCCTGC ACGACGAGTC CTTCGAGCTG 
CCGGTGTACT GGCTGTGCGT CTCGCGGTTC CCCAGGACGT TCCTGCCGGA GATCCTGGGC 
CTGAACCTGG CGATGGAGCT GTCCGGGGTC GGCGGCGGGT ACCGGGACTC GCGGATCGCG 
TTGCGCCACC ACGGTTTCAG CACCCAGTTC GTGGACCTGC ACAACACCAT CGACAACGTC 
TCCACCGGCC ACTCGGCGTG GGCCGTGGAC GCGATCGACG GCTACCTCGC CGAGCTGCCG 
CCCCTCGCGG GCCGCCGCGA CGACGACGCG GTGTGGCAGC GCGTCCGGAC GGGTTACCGC 
TCGCTGAACC CGCCGGAGGG CGTCGTGGCG ACGCTCTGCG GAACCGTGAG AGCCCGTACC 
ACCAGGTACG CGCGGCGATG A 

 

Protein sequence

MSVSESEHRA AYLRALDPEW PRPREDELPR LLAALAEAPA AEALATEALA TGEADAELTG 
PDELVAGVRE WSAAEALVFR EILAGPSTGS AQARVLANCA PLALSAGAWL QWLPSAGDAE 
SELTLRVLAL YASDVGVGYP HADRGSDYRA LLRAHRVRDE TPGPRLAGSD RIESAAFRFP 
ALLLAMSRLP RRFRPELLGA DLCLRAVGVL PPLAGAGADA LGVPLGLLDL GAARWDEPRP 
ALELSLAAAE AVLAAGDGAR LRHGFAWAWH ELRRWCAGLA REVRLATHPD YDVWRLIWTR 
ARQAAVYHGG FPLEGRPLAH WFADVDAGPG AFLDALARSA LVRPGQPDRS PLLTGLIGEK 
GRMFRVFTED EVAVLRRWIA QLPPPGAEVG AAGSVREELH RAQRSWSRNG DLPEADHRST 
VDQGGDFGSP SPRAAYRTLL GREDPPGLRR FAHDYATRWL ARSRYGLDRA PGQLPPRWDP 
ETGLRAWLAA EHERHSSEHE AGRPRVPDRE ALVESTLQLA PLIMIDGGWL QGFTDHQHAS 
SASGHFLFQT YWDELGNGVR ELNHPGIYRD LLREMGVDLP PTDSPEFTAW PGLHDESFEL 
PVYWLCVSRF PRTFLPEILG LNLAMELSGV GGGYRDSRIA LRHHGFSTQF VDLHNTIDNV 
STGHSAWAVD AIDGYLAELP PLAGRRDDDA VWQRVRTGYR SLNPPEGVVA TLCGTVRART 
TRYARR