| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3882 |
|---|
| Symbol | |
|---|
| ID | 8328075 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 4553487 |
|---|
| End bp | 4555022 |
|---|
| Gene Length | 1536 bp |
|---|
| Protein Length | 511 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644944368 |
|---|
| Product | peptidase S1 and S6 chymotrypsin/Hap |
|---|
| Protein accession | YP_003101605 |
|---|
| Protein GI | 256377945 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.405793 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAAC GGGCGAATTT GGCCGCAGGC GTGGCTACCG CTGCCGTCGC TGCCGCTCTA
CTCGTTCCCT CTTCCGCTCT TGCCGTGAAC GGCGGAGCGC CGGACGCCAA CGGCGGCTAC
CCGTTCCTGG CCAAGGTCTC CGTCGGCGAC CAGCCCGGCG CCGACGGGCG CGCCTGCACC
GGTGCGCTGA TCGACCAGCG GTGGGTGCTG ACCGCCGCGA GCTGCTTCGC CGACAACCCC
GCCCAGCCGG GGAACCTGGC CGCGGGCAAA CCCGCCAAGG CGGCCAAGGT GAGCCTGCCC
GGCAAGGGCG ACATCGCGGT GGCCAACATC GTCCCGCGCT CCGACCGCGA CCTCGTGCTA
GCCCAGCTGG CCTCCTACGT CACCGACATC ACCCCGGTGC GCGTGGGCAA GACGGCGCCC
AAGCAGGGGG ACTCGGTGCG CGCGGGCGGC TACGGCCGCA CCGCCGACAC CTGGGTGCCG
GACAAGGCCC ACACCGCGGT GTTCACCGTC AAGGCCACCT CAGCGACCAC CCTGTCGATC
GACGGGAACG GCGCGCTGTG CAAGGGCGAC GCGGGCGGTC CCGCGCTGCG CGAGACCTCG
TCCGGGCCCG AACTGGTCGC GGTCACCAGC ACCGCGTGGC AGCGCGGCTG CCTCGGCTCG
ACCGAGACCC GCAGCGGGGC CACCCAGGCG CGCGCCGACG ACATCGCCTC GTGGATCAAC
GAGCGGCTCG TCGTCGACCA GAAGCTGACG GTCAAGGAGG GCAACCTCTA CGAGACCTGG
CACGAGATGC TGCCCGACGG TGTGATCAAG TTCGAGATCG ACGGCGACCG CATCGCCGCC
CAGACCACCG ACGGCACCCT GTGGGTCAAG GAGGGCGCGC TCAACGCCGG GTGGGTTTCG
GAGTACAGCT CGGTCTCCTC GTTCTCCATG GCGGGCAACC GCATCGCCGT GCTCACCAAG
GAGCGGAAGC TCATCGTCAA GGAGGGCAGC CTCTACGCGG GCTGGCAGGA GCAGGCCGGC
AACGTCGACG ACTTCCGCCT GGCGGGCACC CGCGTGGCGT GGCTGCAGAA CGGCAAGCTC
ACCGCCAAGG AGGGCAGCCT CAGCTCGAGC CCGCTGGTGG TGTACGGCGG CGGGGTCACC
AAGTTCGACA TGACCACCAA CCGGATCGCC CTGCAGGCCG ACCAGTTCTG GGTCAAGGAG
GGCAACCTCT ACGCGTCGTG GACGGCGGTC GGCACCGGCG CGGTGGACGA CTTCCAGCTG
TCCGGCAACC GACTCGGCGT CCTGCAGGCG GGCAAGCTCT CCATCAAGGA GGGCAACCTC
TACGGGGTGT GGAACGTGGC GGTCCCGGCC GACGTGGTCA AGTTCGAGAT GGACGGTTCG
CGGTTGGGCG TGCTGATGAA GAACCGCTTC CTGTACGTCA AGGAGGGCGA TCTGGGTCAG
CCGTGGGTCG TGCAGGAGCA GGACGTGACC GATTTCCGCT TGGCGGGCAA CCGGATCGGC
GTGCTCATGC CCAGCGGCAA GCTGGCCGTG AAGTAG
|
|---|
| Protein sequence | MTQRANLAAG VATAAVAAAL LVPSSALAVN GGAPDANGGY PFLAKVSVGD QPGADGRACT
GALIDQRWVL TAASCFADNP AQPGNLAAGK PAKAAKVSLP GKGDIAVANI VPRSDRDLVL
AQLASYVTDI TPVRVGKTAP KQGDSVRAGG YGRTADTWVP DKAHTAVFTV KATSATTLSI
DGNGALCKGD AGGPALRETS SGPELVAVTS TAWQRGCLGS TETRSGATQA RADDIASWIN
ERLVVDQKLT VKEGNLYETW HEMLPDGVIK FEIDGDRIAA QTTDGTLWVK EGALNAGWVS
EYSSVSSFSM AGNRIAVLTK ERKLIVKEGS LYAGWQEQAG NVDDFRLAGT RVAWLQNGKL
TAKEGSLSSS PLVVYGGGVT KFDMTTNRIA LQADQFWVKE GNLYASWTAV GTGAVDDFQL
SGNRLGVLQA GKLSIKEGNL YGVWNVAVPA DVVKFEMDGS RLGVLMKNRF LYVKEGDLGQ
PWVVQEQDVT DFRLAGNRIG VLMPSGKLAV K
|
|---|
| |