Gene Amir_3795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3795 
Symbol 
ID8327987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp4453680 
End bp4454366 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content78% 
IMG OID644944283 
ProductNUDIX hydrolase 
Protein accessionYP_003101521 
Protein GI256377861 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTCCG TGGAAGCAGA ACCCGTGGGC GCCCGACCGG GGCAGGTCGA GCCGGGGCAC 
ATCGAGTCGT CGCTGGTGTC GGTGGACGTG CTGGCGCTGC GGTTCGACGC CGGGTCGGGC 
GCGGTGCTGC TCGGGGTGTC GCGGCGCGAG CTGGAGCCGT TCCTCGGGCG GGACGCGCTG 
CCGGGCGTGC TGCTGGGGAG GGGCGAGCGG CTGCGCGAGG CGGCGGTGCG GGCGGTCGCG 
GGCAAGCTCG GGGTGCCGGA GGGGGCGGTG CGGGCGACCG GGCAGCTGGC CACGTTCGAC 
GAGCCCTCCC GCGACCCGCG CGGGCCGACG CTGTCGATCG CGCTGTGGGC GACCCTCGAC 
CCGGCGCGCT CGGACGGCCC GCGCTGGGCC CCGCTGTCCG CGGTGCCGCC GCTGGCGTTC 
GACCACGACC GGATCGTCGC CGACTGCCGG GCGCTGCTGG GCGAGCGGCT GTGGCGCGAC 
CCGGTGTTCA CCGCCGGGCT GCTCGGCCCG GAGTTCACCA CCGCGCAGGC CCTGGACGCC 
ACCGAGGCGC TGACCGGCGA CCGCCCGTAC CCGGCGAACC TGGGCAGGCT GATGGACCGC 
GTCCCCGGCC TTCGCCGCAC CGAGCAGCAC GCGGCGGCCC GCGCGAAGGG CGGACGGCCG 
CCGCTGGTGT GGCGCTGGGA GGGGTGA
 
Protein sequence
MLSVEAEPVG ARPGQVEPGH IESSLVSVDV LALRFDAGSG AVLLGVSRRE LEPFLGRDAL 
PGVLLGRGER LREAAVRAVA GKLGVPEGAV RATGQLATFD EPSRDPRGPT LSIALWATLD 
PARSDGPRWA PLSAVPPLAF DHDRIVADCR ALLGERLWRD PVFTAGLLGP EFTTAQALDA 
TEALTGDRPY PANLGRLMDR VPGLRRTEQH AAARAKGGRP PLVWRWEG