Gene Amir_3768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3768 
Symbol 
ID8327960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp4432874 
End bp4433503 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content73% 
IMG OID644944258 
Productbeta-lactamase domain protein 
Protein accessionYP_003101496 
Protein GI256377836 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0366381 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGCGC GCGTCGACCA CGCCACCTCG TCCGGGACGT TCTCGCTGGA CGGGCAGACC 
TTCGACGTCG AGAACAACAT CTGGGTCGTC GGCGACGACA GCGAGTGCGT GGTGATCGAC 
GCGCCGCACG CGGTGGAGCC GATCCTGGAG CTGGTCGCGG GCAGGCGGGT GGTCGCGATC 
CTGGCGACGC ACGCGCACGA CGACCACGTC CGGGTGGCGC CCGCGCTGTC CGAGGCGACC 
GGGGCCCCGG TGTGGCTGCA CCCGGCGGAC CTGCCGGTGT GGGAGCTGAC GCACGGTGAG 
CGCCGCCCGG ACGGGCAGCT CTCGGACGGG CAGCGGATCA CGGTCGGGGG CACCGAGCTG 
GTGGTGCTGC ACACGCCCGG TCACGCGCCG GGGGCGGTGT GCTTCCACGC GCCGGAGCTG 
GGCGTGGTGT TCACCGGGGA CACGCTGTTC CGGGGCGGGC CCGGCGCGAC GGGGCGGTCG 
TTCAGCGACT TCCCGACGAT CGTGCGCTCG ATCGAGGAGC GGCTGCTGTC GCTGCCCGAG 
GACACGGTGG TGCACACCGG GCACGGGGAC AGCACGAAGA TCGGCGACGA GAGCCCGCAC 
CTGGGCGACT GGATCACCAG GGGGCACTAG
 
Protein sequence
MTARVDHATS SGTFSLDGQT FDVENNIWVV GDDSECVVID APHAVEPILE LVAGRRVVAI 
LATHAHDDHV RVAPALSEAT GAPVWLHPAD LPVWELTHGE RRPDGQLSDG QRITVGGTEL 
VVLHTPGHAP GAVCFHAPEL GVVFTGDTLF RGGPGATGRS FSDFPTIVRS IEERLLSLPE 
DTVVHTGHGD STKIGDESPH LGDWITRGH