Gene Amir_3757 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3757 
Symbol 
ID8327949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp4419578 
End bp4420198 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content75% 
IMG OID644944248 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003101486 
Protein GI256377826 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0306386 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGAGG CGAAGACACG CCGCCGCGGC GAGGAGCTCG AGCGGGCCAT CCTCGACGCG 
GTGTGGGACG AGCTGGACGA GGTCGGCTAC GACCGGCTCA CCATCGACGG CGTGGCCGCT 
CGCGCCAGGA CCAGTAAACC GGTGATCTAC CGGAGGTGGC CCAGCCGGGC CGAGATGGTG 
CTCGCGGCGT GGCTCAAGCG CGCCCCGAGC TGGCCGGGCC CCGAGGACCG GGGCGACCTG 
CGGACCGACC TGCTGGCCCT GTTCAGCGGC ATCGCCGGGC AGTCCGGGCT GGGCGCGGCG 
CGCGCGGGCG ACCGGACCGG CATGGCCTGG GAGGCCTTCC ACAACCCCGA GGTGGTCGTG 
CTGGTCAGCG ACAAGCTGCT GTGCCCGTCA CCGCTGGGGC ACGCGCTGGA CGGGGTGGTC 
GAGCGCGCGG TCGGACGGGG CGAGCTGCCG CCCCTGGAGC TGCCCGCGCG GGTGAAGCGG 
GTGCCGCTGG ACCTGATCAG GTCCGAGTCG CTGACCCGCT GCGGCCCGCT GTCGCGGCGG 
GTGCTGGAGG AACTGGTGGA CGACGTGTTC CTGCCGCTGC TGCACGGGCT GGCCCGCCGG 
GAGGGGGCAG GCGGGGCGTG A
 
Protein sequence
MTEAKTRRRG EELERAILDA VWDELDEVGY DRLTIDGVAA RARTSKPVIY RRWPSRAEMV 
LAAWLKRAPS WPGPEDRGDL RTDLLALFSG IAGQSGLGAA RAGDRTGMAW EAFHNPEVVV 
LVSDKLLCPS PLGHALDGVV ERAVGRGELP PLELPARVKR VPLDLIRSES LTRCGPLSRR 
VLEELVDDVF LPLLHGLARR EGAGGA