| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3730 |
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| Symbol | |
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| ID | 8327920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 4383621 |
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| End bp | 4384874 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644944219 |
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| Product | type III effector Hrp-dependent outers |
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| Protein accession | YP_003101459 |
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| Protein GI | 256377799 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3395] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGGAG CCATCGCCGA CGACTTCACC GGCGCGACAG ACCTCGCGAT CATGTTGCGC
CGCAACGGAC ACCGGGTCGC GGTCGCGATC GAGGACCACG ACCCCGGCGA GCGGGTCCGA
GCCGGGCTCG ACGCGCTCGT CATCGCGCTC AAGTCCCGCA CCGCCCCCGT CGCGGAGGCC
GTCGCCGCCA CCCGCGCCGC CCACGAGCGG CTGCTCGACT GGGGCGCGCG GCGGGTGTAC
GTGAAGTACT GCTCGACCTT CGACTCCACC GACGAGGGCA ACATCGGCCC CGTGCTGGAC
GCGGTGGCCG ACCGGGCGGG CGCGGAGCGG GTGGTGGTCG TGCCGTCGCT GCCCGCCAAC
GGTCGCACGG TCCACGAGGG CCTGCTGCAC GTGAACGGGC AGCTGCTGGA GCACTCCCCC
CTGCGCCACC ACCCGCTCAC CCCCATGACC CGCTCGCGGG TCGCCGACCT GCTGCGCCCG
CAGACCCGGC ACGAGGTGGC CGAGCTGCAC CTGGACGTGG TGCGCTCCGG CCGCGACGCC
CTGCGCGCCG CGCTGGACGC CACCGCCGCC CGGTACGTGG TCGTGGACGC GGTCGACGAC
GCCGACCTGG CCGTGATCGG CGCGGCGGTC GCCGGGGACG CCGTGGTCAG CGGCGGTTCC
GGGCTCGCGC TCGGCCTGCC CGACCCGCAC GGCGACACCG ACGGGTGGAC CGCCCCCGCG
AGCGGACGCC GGGCCGTGCT GTGCGGCAGC GCCTCCACCG CGACCCGCCG CCAGGTCGCC
GACGCCGCGG GCCGTGCCCA GCCGGTGCTG CGCGTGGACC CCGTGGCCGC CGTGCGCACC
CCGGACCTCG AAGTCGACCG GATCGCCGCG TGGGCCGTCC AGCAACCCGC GGACTCGACG
CCCGTCATCC ACACCACCGC CGACGCGGCC GACCTGGTCC CCGAGGTCGA CGGCCTGCCC
GCCGCCCCGG CCGTCGAGAC CGTGCTGGCC GGGGTCGCGC GGCGCCTGGT CGTGTCGGGC
GTGCGGCACC TGCTCGTCGC GGGCGGCGAG ACCAGCGGCG CGGTCGTGCG CGCCCTGGGG
GTGGGCGTGC TGCGCGTGGG CCCCGAGATC GCCCCCGGCA TCTGCTGGGC CGCCGCCGCC
GCCGCCACCG GCGGTGACGG TGACGACGGC GGGCACGAGG TCGCGCTCGC GCTCAAGAGC
GGCAACTTCG GCCCCGACGA CCTGTTCACC TCGGCCTGGG ACCGGCTCGC GTGA
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| Protein sequence | MLGAIADDFT GATDLAIMLR RNGHRVAVAI EDHDPGERVR AGLDALVIAL KSRTAPVAEA
VAATRAAHER LLDWGARRVY VKYCSTFDST DEGNIGPVLD AVADRAGAER VVVVPSLPAN
GRTVHEGLLH VNGQLLEHSP LRHHPLTPMT RSRVADLLRP QTRHEVAELH LDVVRSGRDA
LRAALDATAA RYVVVDAVDD ADLAVIGAAV AGDAVVSGGS GLALGLPDPH GDTDGWTAPA
SGRRAVLCGS ASTATRRQVA DAAGRAQPVL RVDPVAAVRT PDLEVDRIAA WAVQQPADST
PVIHTTADAA DLVPEVDGLP AAPAVETVLA GVARRLVVSG VRHLLVAGGE TSGAVVRALG
VGVLRVGPEI APGICWAAAA AATGGDGDDG GHEVALALKS GNFGPDDLFT SAWDRLA
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