Gene Amir_3711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3711 
Symbol 
ID8327901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp4361845 
End bp4362468 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content78% 
IMG OID644944200 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003101440 
Protein GI256377780 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.644349 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACGCCC TCGACACCCG CACCCAGCTC CTCGACGCGG CCGAGCGCCT GTTCGCCGAA 
CGCGGCTTCG CGGGCGCCTC GGTCCGCGCC ATCACCGACC TCGCCGGGGC GAACCTGGCC 
GCCGTGAAGT ACCACTTCGG CTCGAAGGCG GACCTGCTCA CCGCGGTCGT GCGCCGCGTC 
GTCGACCCGA TCACCGCCGC GCAGTCCGCG GGCCTGGACC GCCTGCGGGC GCTGCCCGAC 
CCGCCGTCCG CCGCCGACCT CGTGGAGGCG TTCGCGGGCC CGCTGTTCGA CGGCATGGCC 
GAGGGCGACG AGAGCAGGTC GCGGCTGGTC GTGGCGATCG TCTGCGACCC GGCCGAGGAG 
ATGCGCGGCT GGACCGGGCC CGCCGAGGCC GAGGTGCGCG CGCGCTACCT GGCCGCGTTC 
GGCCGGGCGC TGCCGGGGCT CACCCTGGAC GAGCTGGCGT TCCGGCTGCG CAGCGTGCTC 
GCGGTGACGG CCGTGGACCG GGTCGGGGCC GCCAACGGGG ACTCCGATCC CGACTGCGGG 
CCGTCCGGGG GCGGGCGGGC GCGGCGGTGG GTGATCACGT TCCTGGCGGC GGCGATGAGC 
GCCCCGCCCA CCGCCGCCCC CTGA
 
Protein sequence
MDALDTRTQL LDAAERLFAE RGFAGASVRA ITDLAGANLA AVKYHFGSKA DLLTAVVRRV 
VDPITAAQSA GLDRLRALPD PPSAADLVEA FAGPLFDGMA EGDESRSRLV VAIVCDPAEE 
MRGWTGPAEA EVRARYLAAF GRALPGLTLD ELAFRLRSVL AVTAVDRVGA ANGDSDPDCG 
PSGGGRARRW VITFLAAAMS APPTAAP