| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3695 |
|---|
| Symbol | |
|---|
| ID | 8327885 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 4345073 |
|---|
| End bp | 4346884 |
|---|
| Gene Length | 1812 bp |
|---|
| Protein Length | 603 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644944184 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003101424 |
|---|
| Protein GI | 256377764 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGGTCAC CACCGGAGCA GAGCGCCGGA GAGCGGTCCA CCGCCCGAGG CAGGGCGGTG
CTGCTCGCGC TGCGCCTGTA CCTGCGGGAG CTGCGCCGCC ACGGCCCGCT CACCGCGGGC
GGGATGCTGC TGCCCGCGCT GGGCAACACC TGCATGCTGT ACGTGGCGCC GCTGGCGGTC
GCCGCGCTCG CGGGCCGGGT CGTTCAGGGC GCGGGCGTCG CCGAGGCGAC GCCGCTCCTG
CTGGCGTTCG GCGGCGTGCT GCTGTTCGCC GAACTGCTGT GGCGCGTCGG CATCCACTGC
CTGAACCGGG TCGACGGCCG GGGCATCGAG CACCTGTCGG TGTTCGGCTT CGACGCGCTG
CTCGCCAAGG ACGCGTCGTT CTTCCACACC AACTTCGCCG GGTCGCTGAC CAAGCGGGTG
CTCGGCTTCG CGGGCCGCTT CGAGGAGTTC ACCGACGCGC TGGTGTTCAG CGTGGTCGCC
AAGGTCGTGC CGCTGGGCTT CGCGTGCGTG GTGCTGTGGG GCTACCACCC GGCGCTGGTG
GTGGTGCTGC TCGGCCTGAT CGCGGTGACG GGTGTGGCCG TGGCCCCGCT GGTGCGCCGC
CGCCAGCGGC TGGTGGACGC GCGCGAGGCC GCCTACGCGC GGGTGTCCGG GCACGTCGCG
GACGTGCTGT CGAACGTGGA GGCGGTGCGG GCGTTCGGCG CGGAGGAGCG CGAGGGCGCG
GAGCACCGGC GGCGGGCCGC CGAGAGCCGG GCGCTGGCGC TGCGCTCGTG GGACTACGGG
AACCTGCGGG TGGACGTGCT GGTGGCGCCG ATGTCCGTGC TCACCAACGT CCTCGGCCTG
GTGGTGGCGG TGTGGGCGAG CGGCGGGCTG GGCCTGGAGG CGCTGCTGGT GACGTTCACC
TACTACGGCA ACGCCACGCG GATCATGTTC GAGTTCAACC ACGTCTACCG GCGGTTGGAG
GGCTCGCTCA CCGAGGCCGC GCAGTTCACC GAGCTGCTGC TGGACGAGCC GACCGTGGTG
GACGCCGCCG AGCCGGAGCC GACCCCGACC GGGGACTCCC GCGTGAGCTT CGACGGCGTG
GCGTTCGCGC ACCCCGGCGC GCCGCCGCTG TTCACCGGGC TGGACCTGGA CATCCCGGCG
GGCACGCGCG TCGGCCTGGT CGGGCGCTCG GGCGGGGGCA AGACCACGCT GACCCGGTTG
CTGCTGCGGT TGAGCGACGT GGACGGCGGG AGCGTGCGGA TCGGCGGGCA GGACATCTCG
CGGGTGCGGC AGGCGGAGTT GCGCGGGCTG ATCGCGTACG TGCCGCAGGA CCCGTCGATG
CTGCACCGGA CGCTGCGGGA GAACATCGCG TTCGCCAGGC CCGGCGCGAG CGAGGCCGAG
ATCCAGCGGG CGGCCCGCGC CGCGCACGTG ACCGAGTTCG CGCGGGAGCT GCCGGAGGGG
TTCGACACGG TGGTGGGCGA GCGCGGCGTG AAGCTGTCCG GCGGGCAGCG GCAGCGGGTC
GCGCTGGCCC GCGCGATCCT GCGCGACGCG CCGATCCTGC TGCTGGACGA GGCGACGAGC
GCGCTGGACT CGGAGAGCGA GGCGCTGGTG CAGCGGGCGC TGTGGCGGCT GCTGGAGGGG
CGGACGGCGC TGGTGGTGGC GCACCGGTTG AGCACGGTGG TGCGGATGGA CCGGCTGGTG
GTGCTGGACC GGGGGCGGGT CGTGGAGCAG GGCACGCACG CCGAGCTGCT GGACGCCGGC
GGCGCGTACG CGCGGTTGTG GCGGCACCAG TCGGGCGGGT TCCTGGACGA GGCGACGTCG
GGGAAGCGGT AG
|
|---|
| Protein sequence | MGSPPEQSAG ERSTARGRAV LLALRLYLRE LRRHGPLTAG GMLLPALGNT CMLYVAPLAV
AALAGRVVQG AGVAEATPLL LAFGGVLLFA ELLWRVGIHC LNRVDGRGIE HLSVFGFDAL
LAKDASFFHT NFAGSLTKRV LGFAGRFEEF TDALVFSVVA KVVPLGFACV VLWGYHPALV
VVLLGLIAVT GVAVAPLVRR RQRLVDAREA AYARVSGHVA DVLSNVEAVR AFGAEEREGA
EHRRRAAESR ALALRSWDYG NLRVDVLVAP MSVLTNVLGL VVAVWASGGL GLEALLVTFT
YYGNATRIMF EFNHVYRRLE GSLTEAAQFT ELLLDEPTVV DAAEPEPTPT GDSRVSFDGV
AFAHPGAPPL FTGLDLDIPA GTRVGLVGRS GGGKTTLTRL LLRLSDVDGG SVRIGGQDIS
RVRQAELRGL IAYVPQDPSM LHRTLRENIA FARPGASEAE IQRAARAAHV TEFARELPEG
FDTVVGERGV KLSGGQRQRV ALARAILRDA PILLLDEATS ALDSESEALV QRALWRLLEG
RTALVVAHRL STVVRMDRLV VLDRGRVVEQ GTHAELLDAG GAYARLWRHQ SGGFLDEATS
GKR
|
|---|
| |