| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3611 |
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| Symbol | |
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| ID | 8327801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 4225342 |
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| End bp | 4227852 |
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| Gene Length | 2511 bp |
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| Protein Length | 836 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644944106 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003101346 |
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| Protein GI | 256377686 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.586761 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCTCG ACGCGACCAG GCTGGTCGCC CGCTCGCTCA CCCGCAGCTG GTACTTCCGG
CCCGCCCGGC TGGCCGCCGC CGTCGCCGCG GGCATCGCGG GCGTCCTGCT CACCACCGCC
GTGCTGGTGG TCTACTTCGC CGTGCAGGAC GCGCTGCGCG GCGCGCCCAT CACCGCCGTG
CGCGACGGGA TCGTCGGCGT CGAGGCCAAG GCCCCCGGCG GCATGACGCC CGCCGTGGTC
CAGCGGGTCC GCGACACCGG CCTGCCCGCC ACCTCGATGC TCGTGGTCAG CGCCAGCCGC
GTCGAGGACG GCGGTGAGTC CACGCCGGTG CTGGTCTTCG GCGTCGACGC CGACCTCGCG
GACTACGTCG ACGACGACCT GGCCCGCCGC ACCAGGGACC GGCCGCTCGC GGCGGACGAG
GTCTACCTGG CCGCCGACTA CGCCGACCCG CGCGGCATCG GGGCGGGCGA CCGGATCCGG
ATCGGCGGCA CCAGCGGCGT GCGCACCTGG ACCGTGGCCG CCGTGCTGCC CGGCGAGGTC
GCCAACCGGG GCTCGGTCGT CATCGCGCCC AGACCCGTGG TGGCCGAGGC GTTCGGGCGC
GGCGAGCGCT CCGACGCGCT CCTGGTCGAC CCCGGCGACC GCGACCGGGC AGGCGTGGTC
GCGGACGTCA CCGACGCCGT CGACGGGTCC GCCGCCGTGA AGGAGCCCGG AGACCTGCTC
TCCGGGTACC GCAAGGCGTT CCAGACGTTC CTGACCATCC TGAGCATGTT CGCGGTCATC
GCCGTGCTCA CCGCCGGGGT GGTGCTGTTC CTGACCTGGC GGCTGGCGCT GGACGACGCG
CGGCCCGCGC TGGCCAGGAT GCGGCTGACC GGGGTGCGCA CCTCGCACCT GATGCTCGGC
TCGGCCGCCG TCATGGCGCC GATCCTGCTG GTCAGCTACG CGGTCGGCGC GGTCCTCGGC
GTGCTCGTCG GGCGCGACCT CGGCTCGTTC GCCAGGCAGA TCACCGACCT GAGCCAGCAG
GCCGTCACGC CGGGCACGCC GTGGCAGCTG CCCGCGCTGG GCGCGCTGGT CGCCGCGCTG
CTGATGTTCG CGGCGGCCTG GGTGTCCGGG GTGCGGCGGT TCACCAGGGT GCGGGCGATC
GAGGCCGTGT CCGGCAGGGG AGAGGTCGCG GTGCTGCCCG GCGGCGCCCG CACCCCGGCG
CTGGTCGGCG TGGGACTGCT CGTGCTCGGC GCGGTGGCGG TGCTGCTCGG GCCGGAGGGC
GTGCGGTCGG CGGGCCTGGT CCCGCTGCTG GGCGGCGCGG CGCTGCTGGC CGTGGTGCTG
CCCGTGCTGG TGGGCCTGGG GCTGCGCCGG GGCGAGCCGG GACCGGTGCG GCTGGCCGTG
GCCAGGCAGC TCCAGCTCGG CTGGCGGCGC AACGCCGCGC TGTGCGTGAC GTTCACCGTG
TCCGTGGTCT CGGCGGTCGC GATGGCCGGG GTGTCGATCA GCATCAAGAG CGAGGTCGCC
TCGTCGGTGG AGCGCTGGAC CGCGGGCGAC CTGTTCGTCC AGGCCGCGCC GCTGGGCACC
AACCTCGGCA ACGAGACCCT GCCCGCCGAG CTGCGCGAGG AGCTGGTGCG GGTCGACGGG
GTCGAGGCGA TGACCACGTT CTCGTTCGGC TACGTCGAGG TCCGGGACCG CAGGGTGCAG
GCGTGGAGCT GGGGCCGCGA GGACTCCGAC CGGCTCACCG CGCTCACCGT CACCGACGGT
CCCGCCGACG TGCTCGACCA CCTGGACGAC ACGCACATCG CGGTGTCGGT GAACTACGCC
GACGCGCAGG GCGTCGGGGT GGGCGACGTG CTGGAGGTGC CGCTGCCCGG TGGGCACCGG
GACGTCAGCG TCGTCGCGGT CGTGGACGAC TCGGCCTCCG ACGGCGGGAT GCTCGTGGTC
AGCCCCGAGC TGTGGGCGGA GATGACCGCG TCCAGCCAGA TCTACGCGTT CTTCACGAAG
GTCCGCGAGG GCGCCGACGT CGAGGCGGTG CGCGACGGGC TCGCGGCGGT GGTCGCCGAG
GAGCACCCGA GGGCGAAGGT CGTGACGCAG CAGTTCCTGC GCGACACGGT CGCCAACATC
ACCGCGCGGC TGGTGAGCGC CTTCGAGGTG TTCGCGTGGG TGATGTTCGT GCTGGCCGTC
CTGATCGGCG CGGCCACCCT GGCGTCCGGC CTGGTGGAGC GCAGGAGGGC GAACGCGCTG
CTGCGCCTGA GCGGCGGCAC GGCCTCCGGG GTGCGCAAGC AGCTCGTGGC CGAGGTGGTG
CTGATCGCGG TCGGGTCCGT GGTGGTGTCG CTGCCGGTGG GCTGGCTGGC GATCGTGGCC
CTGCTCGACG CCCAGGCCGT GCAGAGCGGC ATCCGCCCGG ACCCGGAGAT CCCGGTCCTG
CTGAGCGCGG TGAGCCTGCC GCTGGTGGTG GCGTGCATGG TGCTCGCGCT GCTGATCGCC
AACCCCGGCA AGGCCAGCAC CCCGCTGCGG GACCTGCTGG CGCAGGACTG A
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| Protein sequence | MALDATRLVA RSLTRSWYFR PARLAAAVAA GIAGVLLTTA VLVVYFAVQD ALRGAPITAV
RDGIVGVEAK APGGMTPAVV QRVRDTGLPA TSMLVVSASR VEDGGESTPV LVFGVDADLA
DYVDDDLARR TRDRPLAADE VYLAADYADP RGIGAGDRIR IGGTSGVRTW TVAAVLPGEV
ANRGSVVIAP RPVVAEAFGR GERSDALLVD PGDRDRAGVV ADVTDAVDGS AAVKEPGDLL
SGYRKAFQTF LTILSMFAVI AVLTAGVVLF LTWRLALDDA RPALARMRLT GVRTSHLMLG
SAAVMAPILL VSYAVGAVLG VLVGRDLGSF ARQITDLSQQ AVTPGTPWQL PALGALVAAL
LMFAAAWVSG VRRFTRVRAI EAVSGRGEVA VLPGGARTPA LVGVGLLVLG AVAVLLGPEG
VRSAGLVPLL GGAALLAVVL PVLVGLGLRR GEPGPVRLAV ARQLQLGWRR NAALCVTFTV
SVVSAVAMAG VSISIKSEVA SSVERWTAGD LFVQAAPLGT NLGNETLPAE LREELVRVDG
VEAMTTFSFG YVEVRDRRVQ AWSWGREDSD RLTALTVTDG PADVLDHLDD THIAVSVNYA
DAQGVGVGDV LEVPLPGGHR DVSVVAVVDD SASDGGMLVV SPELWAEMTA SSQIYAFFTK
VREGADVEAV RDGLAAVVAE EHPRAKVVTQ QFLRDTVANI TARLVSAFEV FAWVMFVLAV
LIGAATLASG LVERRRANAL LRLSGGTASG VRKQLVAEVV LIAVGSVVVS LPVGWLAIVA
LLDAQAVQSG IRPDPEIPVL LSAVSLPLVV ACMVLALLIA NPGKASTPLR DLLAQD
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