Gene Amir_3565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3565 
Symbol 
ID8327755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp4141041 
End bp4141610 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content74% 
IMG OID644944061 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003101301 
Protein GI256377641 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0847285 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCCCC GCCCCGGAGC CGACTCCACC CGCGAGCGCG TCCTGGACGC GGCCACCGCC 
GAGTTCGCCG CGCACGGCAT CGCCGGGGCC CGCGTCGACC GCATCGCCAA GGCCGCGAGG 
ACCAGCAAGG AACGCGTCTA CGCCTACTTC AGCAGCAAGG AGGAGCTCTA CCGGCGCGTC 
AGCGCCCACG AGCTCGCCGC GATCGCCAAG GCCACCCGCC TGGACCCCAC CGACCTGCCC 
GGCTACGCGG GCCGCGTGCA CGACCACTTC GCCGCGCACC CCGAGCGCCA CCGCCTGCTC 
ATGTGGGGCC GCCTGGAGCT GGCCCCCGCG GGCAACCCGG CCGAGGACCC GTTCAAGCGC 
GCCCTCGCCC ACAAGGTCGA GCAGCTGCGC GCCGCCCAGG AGGCGGGCCA CCTCGACCCG 
TCCTGGGACC CGCTCGACGT CCTGACCTTC CTCAACCAGA TCGCCATGTC CTGGGCCGGT 
CAGCAGGAGC TCGAGGACGA GGACTTCGCC GCCGCCCGCC GCGCCGCGAT CGTCACCGCC 
GTGCAGCGCC TCTTCCCGGC CACCGCCTGA
 
Protein sequence
MTPRPGADST RERVLDAATA EFAAHGIAGA RVDRIAKAAR TSKERVYAYF SSKEELYRRV 
SAHELAAIAK ATRLDPTDLP GYAGRVHDHF AAHPERHRLL MWGRLELAPA GNPAEDPFKR 
ALAHKVEQLR AAQEAGHLDP SWDPLDVLTF LNQIAMSWAG QQELEDEDFA AARRAAIVTA 
VQRLFPATA