Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_3563 |
Symbol | |
ID | 8327753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 4136642 |
End bp | 4137565 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 644944059 |
Product | aminoglycoside phosphotransferase |
Protein accession | YP_003101299 |
Protein GI | 256377639 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0510] Predicted choline kinase involved in LPS biosynthesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCGCAGCC GCCCCGAGCA CCTGTCGGAC GAGTCCGTGC GCGCCTGCCT GGCCCGGTCG GGGATCGACG CGGCCGTCCT GGAGCACGCA CCGGTCGGCT TCGGCGACCA CCACTGGCAC GTCACCGACG CCGGTGGCCG CCGGTGGTTC GCGACCGTGG CCGACCTGAC GCGCAAACCG CACTGCGGCC CCGACCGCGA CTCCGCGCTG GCCGGGTTGC GGGCCGCCAT GGGCGTGGCG GTGCGGTTGC GGCAGGCGGG GCTGGAGTTC GTGGTCGCCC CGGTCGGCGA GCCCGTGGCG GAGCTGGACG ACCGGTACGC GCTCAGCGTG TTCCCGCACG TCGCCGGGGT TCCCGGCCAC TTCGGCCAGG AGCTGTCCGA GGCGGACGGC GCGCTGGTGC AGGAGCTGCT CGCCCGGTTG CACGCGACGC CGGTCGACGC GCCCGCGATC CCGATCGCCC CTCCCCCGCC GGACGCCGAC GGGCCCTGGG GCGACGGGCC GTACGCGGAG CGGGCGCGCC TGCTGCTGCG GCAGCACGAG GAGGTCGTCC GCCGCAGGCG CGCGGAGTTC GCGGAACTGG CCGCGGTGGT GCGCCGCCTG CCCGTCGTGC TCACCCACGG CGAGCCGCAC CCCGGCAACC TGATCCGCGC CACGACCGGC TTCCGCCTGG TGGACTGGGA CACCGCGGGC CTCGCCGTCC CCGAGCGCGA CCTCGCCCTG CTGCCCGGCG ACCTGTCCCG CTACCGGGAG CTCACCGGCC GCACCCCCTC CCCCGAGGCC CTGCGCCTGC ACCGGCTGCG CTGGCCGCTG GTGGACCTGG CCGAGTTCAC CGACCTGTTC CGCGCCCCGC ACGACGACGA CCCCGAGACC GCCCTCGCGT GGACCTCGTT CCAGGACACC CTCGCCGCGC TCGCGACCGG CTGA
|
Protein sequence | MRSRPEHLSD ESVRACLARS GIDAAVLEHA PVGFGDHHWH VTDAGGRRWF ATVADLTRKP HCGPDRDSAL AGLRAAMGVA VRLRQAGLEF VVAPVGEPVA ELDDRYALSV FPHVAGVPGH FGQELSEADG ALVQELLARL HATPVDAPAI PIAPPPPDAD GPWGDGPYAE RARLLLRQHE EVVRRRRAEF AELAAVVRRL PVVLTHGEPH PGNLIRATTG FRLVDWDTAG LAVPERDLAL LPGDLSRYRE LTGRTPSPEA LRLHRLRWPL VDLAEFTDLF RAPHDDDPET ALAWTSFQDT LAALATG
|
| |