| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3541 |
|---|
| Symbol | |
|---|
| ID | 8327731 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 4114612 |
|---|
| End bp | 4115649 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 644944039 |
|---|
| Product | alanine dehydrogenase/PNT domain protein |
|---|
| Protein accession | YP_003101279 |
|---|
| Protein GI | 256377619 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0686] Alanine dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGACGC GCCTGTGGTT GCGCAGCGAG GTCCGGTCGA CCGAGCAGCG CGCCCCGATC
ACCCCCGCCG ACGCGAAGAC CCTGGTCGAC GCCGGGACCG AGGTCACCGT CGAGGACTCG
CCGCGGCGGG TCTTCCCCAC CGCCGACTAC GCCGCCGCGG GCTGCCGCGT CGTCGAGGCC
GGTGGGTGGG TCGACGCGCC CCCGGACGTG GTGGTGGTCG GGCTCAAGGA ACTGCCCGAC
CTGCCGGAAC GCCTGCCGCA CCGGCACGTG TTCTTCGGGC ACGCCTACAA GGGGCAGCCC
GGCGCGCGGG AGCTGCTCGG CCGGTTCACG GCCGGTGGTG GCGCGCTGCT GGACCTGGAG
TACCTCACCG ACGACGACGG GCGCAGGCTC ACCGCCTTCG GCTACTGGGC CGGGTACCTG
GGCGCGGCCC TCACCGTCCT CAACGACCGG GGCGCGCTGC CGACGCCGCT GCGGCCCACC
GGGCGCGCCG GGCTGGACGC CGCCCTGCGC GCGCACGACG GACAGAAAAC CACCGCGCTG
GTCGTCGGGG CCCTCGGGCG CTGCGGGCGC GGGGCGCGTG ACGCGCTCGC CGTCGCCGGG
GTCGAGGTCA CCGGGTGGGA CCTGCCCGAG ACCCGGAACC TGGACCGGGC CGCGCTGCTC
CGGCACGACC TGCTCGTCAA CGCCGTCCTC GCCACCGGCC CCGCCGAACC GCTCCTGCGC
CCCGAGGACC TGGACGCGCC CCGCGCCCTG CGCGGCATCG GCGACGTCAG CTGCGACGCG
GGCGGCCCGT ACAACCTGCT GCCCGTGTAC GACGAGGTCA CCACCTGGGA CGAGCCCGTG
CTGCGCCTGC GCGGCGGCGA GCGCCCCCTG GACCTGATCG CCATCGACAA CCTGCCCTCG
CTGCTGGCCG CCGAGTCCAG CGCCGACTTC TCCCGAGACC TGCTCCCCCA CCTGCTCGAC
CTGGACTCCG GTCCGTGGCG GCGCTGCGCG GAGCGCTTCC ACACCACCGT CGCCGCACTG
GAGGCCGACC ATGCCTGA
|
|---|
| Protein sequence | MTTRLWLRSE VRSTEQRAPI TPADAKTLVD AGTEVTVEDS PRRVFPTADY AAAGCRVVEA
GGWVDAPPDV VVVGLKELPD LPERLPHRHV FFGHAYKGQP GARELLGRFT AGGGALLDLE
YLTDDDGRRL TAFGYWAGYL GAALTVLNDR GALPTPLRPT GRAGLDAALR AHDGQKTTAL
VVGALGRCGR GARDALAVAG VEVTGWDLPE TRNLDRAALL RHDLLVNAVL ATGPAEPLLR
PEDLDAPRAL RGIGDVSCDA GGPYNLLPVY DEVTTWDEPV LRLRGGERPL DLIAIDNLPS
LLAAESSADF SRDLLPHLLD LDSGPWRRCA ERFHTTVAAL EADHA
|
|---|
| |