Gene Amir_3489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3489 
Symbol 
ID8327679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp4054712 
End bp4055314 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content76% 
IMG OID644943989 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003101229 
Protein GI256377569 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCACCG CGAAGGGCGC CGCGACCCGC GCGCGCATCG TCGAGGCCGC CGCCGAGGAG 
GTCCGGGAGC GCGGCGCGAG CGCCGCCACC CTGGACGACG TGTGCAGGCG CAGCCGGACC 
GGGAAGAGCC AGGTCTTCCA CTACTTCCCG GACGGCAAGG AGCAGCTGCT GCTGGCCGTG 
GCCGAGCTGG AGGCGGAGCG GGTCTTCGAG GACCAGCAGC CGTACCTGGG CGACCTGACC 
TCGCGCGCGG CGTGGCTGGC GTGGCGCGAC CTGGTGGTGG CGCGGTACCG GGACCAGGGG 
ACGCACTGCC CGCTGGTGGT GCTGATCGCC GAGGTGGGCA GGTTCAGCCC GCAGTCGCGC 
GCGGTGACGG CGGGGCTGCT GCGGCGGTGG CAGGCGTGCG TGCGCGACGG GGTGGTGGCC 
ACGCAGGCGG CGGGCGAGGC CGATCCGGGG CTGGACCCGG ACCGGATGGC GGCGGCGGTG 
ATCGCGGCGG TGCAGGGCGG GGTGACGGTG CTGCTGTCGA CCGGGTCGGC GGAGCACCTG 
GAGGCGGGGA TGGACCTGTG CCTGGAGCGG CTGCTGGGCG CGGGGGCGGC GGGGACGACC 
TGA
 
Protein sequence
MITAKGAATR ARIVEAAAEE VRERGASAAT LDDVCRRSRT GKSQVFHYFP DGKEQLLLAV 
AELEAERVFE DQQPYLGDLT SRAAWLAWRD LVVARYRDQG THCPLVVLIA EVGRFSPQSR 
AVTAGLLRRW QACVRDGVVA TQAAGEADPG LDPDRMAAAV IAAVQGGVTV LLSTGSAEHL 
EAGMDLCLER LLGAGAAGTT