Gene Amir_3432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3432 
Symbol 
ID8327622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp3999559 
End bp4000083 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content76% 
IMG OID644943935 
Productprotein of unknown function DUF1470 
Protein accessionYP_003101175 
Protein GI256377515 
COG category[R] General function prediction only 
COG ID[COG5516] Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCACTTCA ACCCTTACGG CGGCGCGGCG GCCCAGATGG CGGCGACGCT GGTGAACCTG 
GACCGGGACT GCTCGCCCGA GCGGCTGCTG GACGTGCTGC GCACGCTGGA CTACAAGCCC 
GTCGGCACGC TCGACGCGGG CGGGGCGCGG GAGCTGCTGG AGTGGGCGCG GCGGTTGGAG 
CGGGTGTTCG ACGACCCGCG CGGCACGGTC GGGCTGGTCA ACGAGCTGCT GGCCGAGACC 
GCGACCCGCC CGCACATCTC CACGCACGAC GGCCGCCCGC CGCACCTGCA CTTCGCGCCC 
GCCGAGCTGC CCACGCAGGA GCGGGTGCGC GCGTACACGG CGGCGGGGGT GGCGCACGCG 
GTGTGCGACG CGCCGGACCG GCTCGGGCGG TGCGCGGCGC CGGGGTGCGC GGTGGTGTAC 
GTGGACACCT CCCGCAACGG TCGGCGGCGG TTCTGCTCGA CGCGGTGCGC GAACCGGGTG 
CACGTGTCGC TGCACCGCTC GCGGCGCGGG GCCGACGAGG GCTGA
 
Protein sequence
MHFNPYGGAA AQMAATLVNL DRDCSPERLL DVLRTLDYKP VGTLDAGGAR ELLEWARRLE 
RVFDDPRGTV GLVNELLAET ATRPHISTHD GRPPHLHFAP AELPTQERVR AYTAAGVAHA 
VCDAPDRLGR CAAPGCAVVY VDTSRNGRRR FCSTRCANRV HVSLHRSRRG ADEG