Gene Amir_3352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3352 
Symbol 
ID8327542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp3926429 
End bp3927757 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content78% 
IMG OID644943860 
ProductCarboxylesterase type B 
Protein accessionYP_003101100 
Protein GI256377440 
COG category[I] Lipid transport and metabolism 
COG ID[COG2272] Carboxylesterase type B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.844542 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCCGGA GCCCAGCGCC GGTCGTCCGC ACCCCGGCGG GCGCCGTGCG CGGTGTCCGC 
GACGGCTCCG GCGAGCTGTA CCGCGCCATC CCGTACGCGG CGGCCCCCGT CGGGGCGGGC
CGCTTCGCCG CGCCTGCGCC GCACCCCGGC TGGTCCGGCA CGCGCGACGG CGCCCGCCCC
TCCCCCACCG CGCCCCAACC GGTCCGCGAC TTCGGCGCGC TCGACATGAC GCCCTACTTC
GGGCCGGGCT GGGTGCGCGG CGAGGAGTAC CTGACCGTCG ACGTGCGCAC GCCCGCCGCC
GACGACGGCG CGCGGCCGGT GATGGTGTTC GTGCACGGCG GCGGGTTCGT CACCGGGTCG
ACGCGGGCCG CGCTGTACGA CGGGCACGCG TTCGCCCGCG ACGGCGTGGT CCTGGTGACG
GTGAACTACC GCCTCGGCGT GCCCGGATTC CTGGACCTGG CCGGGGCCCC GCGCAACCGG
GGGCTGCTGG ACGTGCTCGC CGCGCTCGGC TGGGTGCGCT CGGCCATCGC GGCGTTCGGC
GGTGATCCGG GCGACGTGAC GGTGTTCGGC CAGTCCGCGG GCGCCACGCT GGTCGGCGCG
CTGCTCGCGA CGCCCCTGGC CGCCGGGTTG TTCCGGCGGG CGGTCGTGCA GAGCGGCAGC
GGGACCGGCG CGTTCACCCC GGAGCAGGCG GGACGGGTCA CCGCCGCCGC GTCTGCCGCG
CTGGGGGTGG CGGCGACCGC CGAGGCGTTC GGGGCGGTCC CGGACGAGCG GTTCCTGGCG
GTGCTGCCCG CGCTGGCCGG GCTCGACCTG CGCACGGGCA CAGCCGCCGA CCCGCTGGCC
GGGTTGAGCC CGTTCAGCCT GGTGCTGGAC GCGCAGCCCG CCGACGCCCT CGCGGACGGC
CCGGCCCGCG ACGTGGACCT GCTGATCGGC TCGAACACCG AGGAGGGGCG GCTGTACGTG
GTGCCGCAAG GGAAGCCGGA GGAGGGGGCG GAGGCGCTCG GGGACGTGCT GTTCGGCTCC
GGGACGGACC GCTTGGCGCT GGCGCACGCG CGGATCTCGG GCGGGCGCAC GCACGTCTAC
TCCTTCGCGC ACCGGTCGAC GGCGCTGGGC GGGCGGCTCG GGGCGGCGCA CACCGTGGAG
CTGCCGTTCG TGTTCGACGT CGCGGACGAG CCGTGGCTGC ACGGCGCGAC CGGGCTGCTC
GGCCCCGACC CCGCCCCCGC CGGGCTGGCC GCGCGCGTGC ACGGGGCCTG GGTGGCGTTC
GCGGGCACCG GGTCACCGGG GTGGGCGGCC TACTCCGCCG AGCACCCGGT GGTGGAGGTG
TTCGGCTGA
 
Protein sequence
MTRSPAPVVR TPAGAVRGVR DGSGELYRAI PYAAAPVGAG RFAAPAPHPG WSGTRDGARP 
SPTAPQPVRD FGALDMTPYF GPGWVRGEEY LTVDVRTPAA DDGARPVMVF VHGGGFVTGS
TRAALYDGHA FARDGVVLVT VNYRLGVPGF LDLAGAPRNR GLLDVLAALG WVRSAIAAFG
GDPGDVTVFG QSAGATLVGA LLATPLAAGL FRRAVVQSGS GTGAFTPEQA GRVTAAASAA
LGVAATAEAF GAVPDERFLA VLPALAGLDL RTGTAADPLA GLSPFSLVLD AQPADALADG
PARDVDLLIG SNTEEGRLYV VPQGKPEEGA EALGDVLFGS GTDRLALAHA RISGGRTHVY
SFAHRSTALG GRLGAAHTVE LPFVFDVADE PWLHGATGLL GPDPAPAGLA ARVHGAWVAF
AGTGSPGWAA YSAEHPVVEV FG