Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_3352 |
Symbol | |
ID | 8327542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 3926429 |
End bp | 3927757 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | 644943860 |
Product | Carboxylesterase type B |
Protein accession | YP_003101100 |
Protein GI | 256377440 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2272] Carboxylesterase type B |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.844542 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGACCCGGA GCCCAGCGCC GGTCGTCCGC ACCCCGGCGG GCGCCGTGCG CGGTGTCCGC GACGGCTCCG GCGAGCTGTA CCGCGCCATC CCGTACGCGG CGGCCCCCGT CGGGGCGGGC CGCTTCGCCG CGCCTGCGCC GCACCCCGGC TGGTCCGGCA CGCGCGACGG CGCCCGCCCC TCCCCCACCG CGCCCCAACC GGTCCGCGAC TTCGGCGCGC TCGACATGAC GCCCTACTTC GGGCCGGGCT GGGTGCGCGG CGAGGAGTAC CTGACCGTCG ACGTGCGCAC GCCCGCCGCC GACGACGGCG CGCGGCCGGT GATGGTGTTC GTGCACGGCG GCGGGTTCGT CACCGGGTCG ACGCGGGCCG CGCTGTACGA CGGGCACGCG TTCGCCCGCG ACGGCGTGGT CCTGGTGACG GTGAACTACC GCCTCGGCGT GCCCGGATTC CTGGACCTGG CCGGGGCCCC GCGCAACCGG GGGCTGCTGG ACGTGCTCGC CGCGCTCGGC TGGGTGCGCT CGGCCATCGC GGCGTTCGGC GGTGATCCGG GCGACGTGAC GGTGTTCGGC CAGTCCGCGG GCGCCACGCT GGTCGGCGCG CTGCTCGCGA CGCCCCTGGC CGCCGGGTTG TTCCGGCGGG CGGTCGTGCA GAGCGGCAGC GGGACCGGCG CGTTCACCCC GGAGCAGGCG GGACGGGTCA CCGCCGCCGC GTCTGCCGCG CTGGGGGTGG CGGCGACCGC CGAGGCGTTC GGGGCGGTCC CGGACGAGCG GTTCCTGGCG GTGCTGCCCG CGCTGGCCGG GCTCGACCTG CGCACGGGCA CAGCCGCCGA CCCGCTGGCC GGGTTGAGCC CGTTCAGCCT GGTGCTGGAC GCGCAGCCCG CCGACGCCCT CGCGGACGGC CCGGCCCGCG ACGTGGACCT GCTGATCGGC TCGAACACCG AGGAGGGGCG GCTGTACGTG GTGCCGCAAG GGAAGCCGGA GGAGGGGGCG GAGGCGCTCG GGGACGTGCT GTTCGGCTCC GGGACGGACC GCTTGGCGCT GGCGCACGCG CGGATCTCGG GCGGGCGCAC GCACGTCTAC TCCTTCGCGC ACCGGTCGAC GGCGCTGGGC GGGCGGCTCG GGGCGGCGCA CACCGTGGAG CTGCCGTTCG TGTTCGACGT CGCGGACGAG CCGTGGCTGC ACGGCGCGAC CGGGCTGCTC GGCCCCGACC CCGCCCCCGC CGGGCTGGCC GCGCGCGTGC ACGGGGCCTG GGTGGCGTTC GCGGGCACCG GGTCACCGGG GTGGGCGGCC TACTCCGCCG AGCACCCGGT GGTGGAGGTG TTCGGCTGA
|
Protein sequence | MTRSPAPVVR TPAGAVRGVR DGSGELYRAI PYAAAPVGAG RFAAPAPHPG WSGTRDGARP SPTAPQPVRD FGALDMTPYF GPGWVRGEEY LTVDVRTPAA DDGARPVMVF VHGGGFVTGS TRAALYDGHA FARDGVVLVT VNYRLGVPGF LDLAGAPRNR GLLDVLAALG WVRSAIAAFG GDPGDVTVFG QSAGATLVGA LLATPLAAGL FRRAVVQSGS GTGAFTPEQA GRVTAAASAA LGVAATAEAF GAVPDERFLA VLPALAGLDL RTGTAADPLA GLSPFSLVLD AQPADALADG PARDVDLLIG SNTEEGRLYV VPQGKPEEGA EALGDVLFGS GTDRLALAHA RISGGRTHVY SFAHRSTALG GRLGAAHTVE LPFVFDVADE PWLHGATGLL GPDPAPAGLA ARVHGAWVAF AGTGSPGWAA YSAEHPVVEV FG
|
| |