Gene Amir_3310 details

Gene Information

• Locus tag: Amir_3310
• ID: 8327500
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: -
• Start bp: 3886345
• End bp: 3887115
• Gene Length: 771 bp
• Protein Length: 256 aa
• Translation table: 11
• GC content: 78%
• IMG OID: 644943822
• Product: transcriptional regulator, TetR family
• Protein accession: YP_003101062
• Protein GI: 256377402

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.0000381613
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACGTACC ATCGATTCGT GGAGGTCACC CCGGAGAGCG GCGCACCCCG CCGCAGGCGC 
GGCGCGACAG GACCCGACGA CGACGCCTCG GTGCGCGCCG CGCTGGTCGA GGCGGCCGGG 
CGCGGGCTGG CCGCCTCGCC GGACGGCGAG ATCGCCACCC GCGCGGTGTG CGAGGAGGTC 
GGCGTGACGC AGCCGGTGCT CTACCGGCTG TTCGGGGACA AGCGCGGGCT GCTCGACGCG 
GTCGCCGACG CCGGGTTCGA GCGGTACGCG CGGCGCAAGG GCGAGCTGGA GGCCACCGGC 
GACCCGGTGG CCGACCTGCA CGCCGGGTGG GACGACCACA TGGCGTTCGC CGCCGAGAAC 
CCGGCGCTGT ACCAGCTGAT GTTCGCGCCC CGGCCGCACG CGGGCTCGTC CGCGCACCGA 
CGCGTCCTGG AGCTGCTGGA GGCCACGCTG GTGCGCTGCG CGGCGGCGGG CGCGCTGCGC 
ACGAGCCCCG GCCACGCGGC CCGGCTGATC CTGCCCGCGA ACGTGGGCGT GGCGCTGAGC 
CGCATCGCGC AGCCCGCGCT GTACGACGAC CCGGAGCTGT CCCACCGGGC GCGGGACGCG 
GTGTTCGCCG CCGTGCTCAC CGACGCGGGC GCGCCCGCGG GCCCCGACCC CGTGCGGGCG 
GCGGCCCGGC AGCTGCGGTC CCGGCTGTCG CTGCACGGGA CCGGCGAGCT GGAACCGGTC 
GAGACCGCGC TGCTCGACCG GTGGCTCGAA CGCCTGGACC AGCCCGGCTG A 

 

Protein sequence

MTYHRFVEVT PESGAPRRRR GATGPDDDAS VRAALVEAAG RGLAASPDGE IATRAVCEEV 
GVTQPVLYRL FGDKRGLLDA VADAGFERYA RRKGELEATG DPVADLHAGW DDHMAFAAEN 
PALYQLMFAP RPHAGSSAHR RVLELLEATL VRCAAAGALR TSPGHAARLI LPANVGVALS 
RIAQPALYDD PELSHRARDA VFAAVLTDAG APAGPDPVRA AARQLRSRLS LHGTGELEPV 
ETALLDRWLE RLDQPG