| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3296 |
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| Symbol | |
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| ID | 8327486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 3866242 |
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| End bp | 3867291 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644943808 |
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| Product | 3-dehydroquinate synthase |
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| Protein accession | YP_003101048 |
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| Protein GI | 256377388 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0337] 3-dehydroquinate synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.126555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCCAGCT CCACCCACCC CGCCCCCACC GCCGCCACCA CCCGCGAGGT CCGGGTCGAG
CTGGGCGAGC GCGCCTACAC CGTCCACATC GGACACGGCG TGCGCGCCGC CCTCCCGGAC
GTCGTGCGGG CCCTCGGCGC GCGCCGCGCC GTCGTGGTCA CCGCCCGCCC GGCGGACCAG
ACGCCCGACC CCGGCGTCCC CTCCCTCGTC CTCCCGGCCC GCGACGGCGA GCACGACAAG
ACCCTCGCCA CCGTCGCCCA CCTGTGCAGC CGGTTCGCCG AGTTCGGCCT GACCCGCGCC
GACGTCGTCG TCTCCTGCGG CGGCGGCACC ACCACCGACG CGGTCGGCCT CGCCGCCTCG
CTCTACCACC GGGGCACCCC GGTGGTGCAC GTGCCGACCT CGCTGCTGGC CCAGGTCGAC
GCGAGCGTCG GCGGCAAGAC GGCGGTCAAC CTCCCCGAGG GCAAGAACCT CGTCGGCGCC
TACTGGCAGC CCGCCGCCGT GCTGTGCGAC CTCGACCTGC TCGCCACCCT GCCCGAGCGC
GAGCTGCGCA ACGGCCTCGG CGAGATCGCC CGCTGCCACT TCATCGGCGC GCCGGGCCTG
GACCGGCTGC CGCTGCTGGA CCAGGTGGCG GCGAGCGTCG CCCTCAAGGC CCGCGTCGTG
GCCGCCGACG AGCGCGACTC CGGCCTGCGG CACACCCTCA ACTACGGCCA CACCCTCGGC
CACGCCCTGG AGCTCGCCAC CGGTTTCGCG GTGCGGCACG GCGAGGGCGT CGCGATCGGC
ACGGTCTTCG CCGGCCGCCT CGCGGGCGCG CTCGGCCGGA TCGGCCCGGA CCGGGTGGCC
GAGCACCACT CCGTGGTCGC GGGCTACGGG CTGCCCGTCG CGCTGCCGCC GGGCGTGTCG
GACGACGAGC TGCTGCGGTT CATGCGCCGC GACAAGAAGT CCACCGGCGG CCTGGCGTTC
GTGCTCGACG GCCCGCGCGG TGCCGAGCTG GTGCGCGACG TCGACGAGCA CGTCGTCGCC
ACCACCCTGG CCGCGATGCC CCGAGCCTGA
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| Protein sequence | MPSSTHPAPT AATTREVRVE LGERAYTVHI GHGVRAALPD VVRALGARRA VVVTARPADQ
TPDPGVPSLV LPARDGEHDK TLATVAHLCS RFAEFGLTRA DVVVSCGGGT TTDAVGLAAS
LYHRGTPVVH VPTSLLAQVD ASVGGKTAVN LPEGKNLVGA YWQPAAVLCD LDLLATLPER
ELRNGLGEIA RCHFIGAPGL DRLPLLDQVA ASVALKARVV AADERDSGLR HTLNYGHTLG
HALELATGFA VRHGEGVAIG TVFAGRLAGA LGRIGPDRVA EHHSVVAGYG LPVALPPGVS
DDELLRFMRR DKKSTGGLAF VLDGPRGAEL VRDVDEHVVA TTLAAMPRA
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