Gene Amir_3231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3231 
Symbol 
ID8327421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp3766182 
End bp3767804 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content71% 
IMG OID644943745 
Productpotassium-transporting ATPase subunit A 
Protein accessionYP_003100985 
Protein GI256377325 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2060] K+-transporting ATPase, A chain 
TIGRFAM ID[TIGR00680] K+-transporting ATPase, KdpA 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTCGA CCACGGCGGG CCTGCTCCAG GTCGCCCTGC TCATCGCCGC GCTGGCCGCC 
GCCTACCGGC CGTTCGGCGA CTACATGGCC CGCGTCTACA CCGACGCCAA GCACACCAGG
GTCGAGCGCC TGCTCTACCG CGCAGCCCGC GTCGACCCCG ACTCGCAGCA GCGCTGGGGC
ACCTACGCGC AGGGCGTGCT CGGCTTCTCC CTCGTCGGCG TGGCCCTGCT GTACCTGATG
CAGCGAGTGC AGCCCTGGCT GCCGTTCGAC CACGACCGGG GCGCGGTCTC GCCCGGCATG
GCGTTCAACA CCGCCGCCTC GTTCGTGGCC AACACGAACT GGCAGTCCTA CGTCCCGGAG
ACCGTCCTCG GCCACACCGT GCAGATGGCC GGGCTGACCG TGCAGAACTT CGTCTCCGGC
GCGGTCGGCA TGGCCGTCGC CGTGGCGCTG GTGCGCGGCT TCACCCGCGA GGGCTCCGAC
CGGCTCGGCA ACTTCTGGGT CGACCTCACC AGGGGCACCC TGCGCGTCCT GCTGCCCGTG
TCGTTCGTGT TCGCCATCGT GCTGGTCGCG ACCGGCGTCG TGATGAGCCT GAAGGCGGGC
GTGGACGTGG ACGGCCAGCA GGTCGCCATC GCCCCGGCCG CCTCGCAGGA GGCCATCAAG
GAGCTCGGCA CCAACGGCGG CGGCATCTTC AACGCCAACT CCGCCCACCC GTTCGAGAAC
CCCAACGGCT GGTCGAACCT GGTCGAGATC TTCCTGATCC TGCTGATCCC GGTCTCGCTC
ACCCGCACCT TCGGCACCCT GGTCGGCAAC CGCAAGCAGG GCTACGTGCT GCTCAGCGTC
ATGGGCGTGC TGTGGACCGC GATGCTCGCG GTCATCTGGG CGGCCGAGGC GCACGGCCTG
CGCCCCCTGG AGGGCAAGGA GCTGCGGTTC GGCGTCCCCG GCAGCGCCCT GTTCGCCAAC
ACCACCACCG CCACCTCCAC CGGCGCGGTC AACGCCATGC ACGACAGCCT CACCGGCCTG
GGCGGCGGCG CGACGCTGCT GAACATGCTG TTCGGCGAGA TGACGCCGGG CGGCGTCGGC
ACCGGCCTGT ACAGCATCCT GGTGATGGCG ATCATCGCGA TGTTCCTGGC CGGTCTGATG
GTCGGGCGCA CCCCGGAGTA CCTGGGCAAG AAGCTGGGCC GCCGCGAGGT GACCTGCGCC
GCGCTGTCCA TCCTGGCGAT GCCCGCGCTG GTGCTGGTCG GCGCCGGGAT CTCGGCGGTG
CTGCCGTCGA CGGCCGGGTA CCTGAACAAC CCCGGCGAGC ACGGCCTGTC CGAGATCCTC
TACGCCTACG CGTCGGCCTC GAACAACAAC GGCAGCGCGT TCGCGGGCAT CACCGTGACC
AGCGACTGGT TCCAGTCCTC GCTCGGCGTC TGCATGTTGC TCGGCCGGTT CGTCCCGATC
ATCGCGGTGC TGTGCCTGGC CGGTTCGCTC GCCCGGCAGA AGCGCGCCCC GCGGACCGCG
GGCACGCTGC CCACGGACAG CCCGCTGTTC GCCTCGCTGC TGGTCGGCGC GATCGTGCTC
GTCGCCGCCC TCACCTTCGT CCCCGCCCTC GCCCTCGGCC CCATCGCGGA GGCACTGCTG
TGA
 
Protein sequence
MSSTTAGLLQ VALLIAALAA AYRPFGDYMA RVYTDAKHTR VERLLYRAAR VDPDSQQRWG 
TYAQGVLGFS LVGVALLYLM QRVQPWLPFD HDRGAVSPGM AFNTAASFVA NTNWQSYVPE
TVLGHTVQMA GLTVQNFVSG AVGMAVAVAL VRGFTREGSD RLGNFWVDLT RGTLRVLLPV
SFVFAIVLVA TGVVMSLKAG VDVDGQQVAI APAASQEAIK ELGTNGGGIF NANSAHPFEN
PNGWSNLVEI FLILLIPVSL TRTFGTLVGN RKQGYVLLSV MGVLWTAMLA VIWAAEAHGL
RPLEGKELRF GVPGSALFAN TTTATSTGAV NAMHDSLTGL GGGATLLNML FGEMTPGGVG
TGLYSILVMA IIAMFLAGLM VGRTPEYLGK KLGRREVTCA ALSILAMPAL VLVGAGISAV
LPSTAGYLNN PGEHGLSEIL YAYASASNNN GSAFAGITVT SDWFQSSLGV CMLLGRFVPI
IAVLCLAGSL ARQKRAPRTA GTLPTDSPLF ASLLVGAIVL VAALTFVPAL ALGPIAEALL