Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_3213 |
Symbol | |
ID | 8327403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 3743552 |
End bp | 3744946 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644943727 |
Product | glycoside hydrolase family 43 |
Protein accession | YP_003100967 |
Protein GI | 256377307 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3507] Beta-xylosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.331095 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGCGCCA CGACCCACCC CACGAGGCGC ACCAGGAGCG GCCTGGTCGC GCTGGTGGTC CTGGCGCTGG CCGTCACCGC GTTCAGCGCG GTGACGGCCG GCCCCGCCAG GGCGGACAAC CCGGTGGTGC AGCACGTCTA CACCGCCGAC CCGGCGCCCC TGGTCCACAG TGGACGGCTC TACCTGTACA CCGGCCACGA CGAGGACGGC TCGACCTACT TCACCATGAA GGAGTGGCGG GTCTGGTCCA CCACCGACAT GGTGAACTGG ACCGACCACG GCTCGCCGAT GAACGTGGGC ACCTTCGCGT GGGCCAGCAA GGACGCCTGG GCCGGGCAGG CGGTGGAGCG GAACGGGAGG TTCTACTGGT ACGTGCCGGT GGTCAACCGG GCGACCGGGC GCATGGCCAT CGGCGTCGGG GTCTCCGACA GCCCGACCGG ACCGTTCCGC GACGCGATCG GCCGCCCGCT GGCGGAGAAC GGCGAGATCG ACCCGTCGGT GTTCATCGAC GACGACGGCC AGGCGCACCT GTACTGGGGC AACCCGAACC TGTGGCACGC GCGCCTGAAC CCCGACATGG TCTCGCTGGC GAGCGCGCCC GCGCAGATCC CGCTGACCAC CGCCGGGTAC GGCGCGCGCA CCGGGAACGC CCAGCGCCCC ACCCTCTACG AGGAGGGGCC GTGGGTCTAC AAGCGGGGCG GGCTGTACTA CAACGTGTTC GCCGCGCAGT GCTGCTCGGA GTTCCTCGCC CACTCGACCG CGCCGACGCC CACCGGGCCG TGGACGTACC GGGGCGTGGT GATGCCGACG CAGGGCAGCA GCTTCACCAA CCACGCGGGG GTGATCGACT ACAAGGGCGG CTCGTACCTG TTCTACCACA ACGGCGCCCT GCCGGGCGGC GGCGGTTACA CCAGGTCGGT CGCGGTGGAG AGGTTCACCT ACAACGCGGA CGGCACGATC CCCAGGACGG GCATGTCCAC CTCGGGCCCG CCGCCCGCCG ACACGCTGAA CCCGTACGCG CGGCAGGAGG GCGAGACGAT CGCGTGGGGC AGCGGGGTGG AGACCGAGGT GTCCGGCGAG GGCGGCATGA ACCTGAGCCA CCTGGAGAAC GGCGACCACG TCAAGGTCCG CTCGCTGGCG TTCGGCGCGG GCGCCCGGAC GTTCACCGCG CGCGTCGCCT CCGCGACGTC GGGCGGCGCG CTGGAGCTGC GCACGGACGG CCCGACCGGC CCGGTGGCCG GCCGCTGCAC CGCGCCGGGC ACGGGCGGCT GGCAGACCTG GACCACGGTG TCCTGCTCGG TGAGCGGGTT GACCGGGACG CGTGACCTGT ACTTGCGGGC GGCGGGCGGG AGCGGCTACC TGTTCAACGT CGACTGGTGG CGGTTCACCG CGTGA
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Protein sequence | MRATTHPTRR TRSGLVALVV LALAVTAFSA VTAGPARADN PVVQHVYTAD PAPLVHSGRL YLYTGHDEDG STYFTMKEWR VWSTTDMVNW TDHGSPMNVG TFAWASKDAW AGQAVERNGR FYWYVPVVNR ATGRMAIGVG VSDSPTGPFR DAIGRPLAEN GEIDPSVFID DDGQAHLYWG NPNLWHARLN PDMVSLASAP AQIPLTTAGY GARTGNAQRP TLYEEGPWVY KRGGLYYNVF AAQCCSEFLA HSTAPTPTGP WTYRGVVMPT QGSSFTNHAG VIDYKGGSYL FYHNGALPGG GGYTRSVAVE RFTYNADGTI PRTGMSTSGP PPADTLNPYA RQEGETIAWG SGVETEVSGE GGMNLSHLEN GDHVKVRSLA FGAGARTFTA RVASATSGGA LELRTDGPTG PVAGRCTAPG TGGWQTWTTV SCSVSGLTGT RDLYLRAAGG SGYLFNVDWW RFTA
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