Gene Amir_3213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3213 
Symbol 
ID8327403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp3743552 
End bp3744946 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content72% 
IMG OID644943727 
Productglycoside hydrolase family 43 
Protein accessionYP_003100967 
Protein GI256377307 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3507] Beta-xylosidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.331095 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCGCCA CGACCCACCC CACGAGGCGC ACCAGGAGCG GCCTGGTCGC GCTGGTGGTC 
CTGGCGCTGG CCGTCACCGC GTTCAGCGCG GTGACGGCCG GCCCCGCCAG GGCGGACAAC
CCGGTGGTGC AGCACGTCTA CACCGCCGAC CCGGCGCCCC TGGTCCACAG TGGACGGCTC
TACCTGTACA CCGGCCACGA CGAGGACGGC TCGACCTACT TCACCATGAA GGAGTGGCGG
GTCTGGTCCA CCACCGACAT GGTGAACTGG ACCGACCACG GCTCGCCGAT GAACGTGGGC
ACCTTCGCGT GGGCCAGCAA GGACGCCTGG GCCGGGCAGG CGGTGGAGCG GAACGGGAGG
TTCTACTGGT ACGTGCCGGT GGTCAACCGG GCGACCGGGC GCATGGCCAT CGGCGTCGGG
GTCTCCGACA GCCCGACCGG ACCGTTCCGC GACGCGATCG GCCGCCCGCT GGCGGAGAAC
GGCGAGATCG ACCCGTCGGT GTTCATCGAC GACGACGGCC AGGCGCACCT GTACTGGGGC
AACCCGAACC TGTGGCACGC GCGCCTGAAC CCCGACATGG TCTCGCTGGC GAGCGCGCCC
GCGCAGATCC CGCTGACCAC CGCCGGGTAC GGCGCGCGCA CCGGGAACGC CCAGCGCCCC
ACCCTCTACG AGGAGGGGCC GTGGGTCTAC AAGCGGGGCG GGCTGTACTA CAACGTGTTC
GCCGCGCAGT GCTGCTCGGA GTTCCTCGCC CACTCGACCG CGCCGACGCC CACCGGGCCG
TGGACGTACC GGGGCGTGGT GATGCCGACG CAGGGCAGCA GCTTCACCAA CCACGCGGGG
GTGATCGACT ACAAGGGCGG CTCGTACCTG TTCTACCACA ACGGCGCCCT GCCGGGCGGC
GGCGGTTACA CCAGGTCGGT CGCGGTGGAG AGGTTCACCT ACAACGCGGA CGGCACGATC
CCCAGGACGG GCATGTCCAC CTCGGGCCCG CCGCCCGCCG ACACGCTGAA CCCGTACGCG
CGGCAGGAGG GCGAGACGAT CGCGTGGGGC AGCGGGGTGG AGACCGAGGT GTCCGGCGAG
GGCGGCATGA ACCTGAGCCA CCTGGAGAAC GGCGACCACG TCAAGGTCCG CTCGCTGGCG
TTCGGCGCGG GCGCCCGGAC GTTCACCGCG CGCGTCGCCT CCGCGACGTC GGGCGGCGCG
CTGGAGCTGC GCACGGACGG CCCGACCGGC CCGGTGGCCG GCCGCTGCAC CGCGCCGGGC
ACGGGCGGCT GGCAGACCTG GACCACGGTG TCCTGCTCGG TGAGCGGGTT GACCGGGACG
CGTGACCTGT ACTTGCGGGC GGCGGGCGGG AGCGGCTACC TGTTCAACGT CGACTGGTGG
CGGTTCACCG CGTGA
 
Protein sequence
MRATTHPTRR TRSGLVALVV LALAVTAFSA VTAGPARADN PVVQHVYTAD PAPLVHSGRL 
YLYTGHDEDG STYFTMKEWR VWSTTDMVNW TDHGSPMNVG TFAWASKDAW AGQAVERNGR
FYWYVPVVNR ATGRMAIGVG VSDSPTGPFR DAIGRPLAEN GEIDPSVFID DDGQAHLYWG
NPNLWHARLN PDMVSLASAP AQIPLTTAGY GARTGNAQRP TLYEEGPWVY KRGGLYYNVF
AAQCCSEFLA HSTAPTPTGP WTYRGVVMPT QGSSFTNHAG VIDYKGGSYL FYHNGALPGG
GGYTRSVAVE RFTYNADGTI PRTGMSTSGP PPADTLNPYA RQEGETIAWG SGVETEVSGE
GGMNLSHLEN GDHVKVRSLA FGAGARTFTA RVASATSGGA LELRTDGPTG PVAGRCTAPG
TGGWQTWTTV SCSVSGLTGT RDLYLRAAGG SGYLFNVDWW RFTA