Gene Amir_3164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3164 
Symbol 
ID8327354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp3655388 
End bp3655732 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content73% 
IMG OID644943681 
Productanti-sigma-factor antagonist 
Protein accessionYP_003100921 
Protein GI256377261 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.833812 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACATCTC CCGAGACCCA CGCCATCACC GGGGAGGTCG TCGACGGCGT GGCCGTCGTG 
CGCGCCTCCG GCGAGATCGA CATGGCCAAC AGCGACGACC TGCGCGTGAT CGCCACCGAC
CTGGTCGACG GCGGGGCCCA GGCCCTGGTC GTCGACCTGT CCGAGGTGAC CTTCTTCGCC
TCCTCCGGCA TCGCCGCGCT CGCCTACCTG CGCGACCGCG TCGGCCGGGG ACTGGTGCGG
GCGGTGCCCA GCCGCAGCGT GCGGCGCTCG CTGGAGGCGA CCGCCGTGGA CAAGCTGATC
CCGCTGCACG AGAACCTGGA GGAGGCGCTG ACGGCCGCGC GCTGA
 
Protein sequence
MTSPETHAIT GEVVDGVAVV RASGEIDMAN SDDLRVIATD LVDGGAQALV VDLSEVTFFA 
SSGIAALAYL RDRVGRGLVR AVPSRSVRRS LEATAVDKLI PLHENLEEAL TAAR