Gene Amir_3153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3153 
Symbol 
ID8327343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp3639554 
End bp3640222 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content77% 
IMG OID644943670 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003100910 
Protein GI256377250 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTGGACT TCCAGCGCGC CCGCAGGCCC GAGCAGGTCC AGGCGCGCAG GGCCGCCATC 
CTGGACGCCG CCGAGGCCGC GCTGGAGCAG CGCCCGCTGG ACGCGATCAC GCTGCGCGAG 
CTGAGCTGCC GGGTGGGCCT GGCGAAGTCG AACGTGCTGC GCTACTTCGG CACCCGCGAG 
GCCGTCTACC TGGAGGTGCT GCGGCGCCGC TGGTCGTCCT GGTTGGACGG TCTGGAGCCG 
GTGCTGCGCT CGTGCGCGCC GGAGCCGGTG CCGTACGGGC GGGCGGTCGC GGTCGCGACG 
GCGGTCGCCG GGGCGCTGGT GGCCGATCCG CCGCTGTGCG AGCTGTTCGG CTCGATGGCC 
AGCGTGCTGG AGCGCAACGT GGACGTGGAC GTGGCGCGCG GGTTCGCGGC GGCGGCCGGG 
CGGCGCTCCG ACCGGTTGGC AGGGCTGGTC GCGGAGCGCC TGCCGCACCT GGGCGCGGCG 
GGCACGCGGC ACTTCGCGGA GTCGGTCGTG GTGGTGACCG CCGGGCTGTG GGGCCGGGCC 
AGGCCGACCG AGGAGGTGGC GCGGGCGAGC GCCGACCTAG GGCTGCCCGC CGCCGACGAG 
GTGTTCCGGG CGGCGCTGAC CGAGAGCCTG GTCAACCAGC TGATCGGCCT GGCCGCCCGC 
GCGAGCTGA
 
Protein sequence
MVDFQRARRP EQVQARRAAI LDAAEAALEQ RPLDAITLRE LSCRVGLAKS NVLRYFGTRE 
AVYLEVLRRR WSSWLDGLEP VLRSCAPEPV PYGRAVAVAT AVAGALVADP PLCELFGSMA 
SVLERNVDVD VARGFAAAAG RRSDRLAGLV AERLPHLGAA GTRHFAESVV VVTAGLWGRA 
RPTEEVARAS ADLGLPAADE VFRAALTESL VNQLIGLAAR AS