Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_3147 |
Symbol | |
ID | 8327337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 3634208 |
End bp | 3634759 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644943665 |
Product | regulatory protein TetR |
Protein accession | YP_003100905 |
Protein GI | 256377245 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCTAGGG CGGCGCTGTC GGCGGAGGCG GTGGTGGACA TCGCGCTGCG CCTGGTCGAC GAGGAGGGCG CGGGCGCGCT GACGCTGGCG GCGGTGGCGT CGCGGGCGGG GGTGGCGACG CCGTCGCTGT ACAAGCACGT GCGCAACCTC GCGGACCTGC GGGCGCTGAT GTCGGCGCGG ATCGCGACCG AGCTGTCCGA CCGCATCGGC GACGCCGCCC TCGGCCGCTC GGCCGACGAG GCGGTGCGCG CCCTGATGCT CGCGTGGCGC GACTACGCGA AGGAGCACCC GCACCGCTAC TCCGCGATGC TCCAGAGCTC GCAGCCGCTG GTGGACCAGG CGGCGAAGCG GCTGGTGGAG ATCCTGCTGG GGGCGATGCG GGCGTACGGG ATGGACGAGG CGCGGGCGGT GCACGCGGTG CGCTGCCTGC GCGCGGCGGT GCACGGGTGG GCGGTGCTGG AGGCGCAGAA CGCGTTCCAG TGGCCGGAGG AGCTGGACGA GAGCTACGAG CTGCTGGTGC GGATGGTGAC GGGCGGGTTG CGGGAGGGGT GA
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Protein sequence | MARAALSAEA VVDIALRLVD EEGAGALTLA AVASRAGVAT PSLYKHVRNL ADLRALMSAR IATELSDRIG DAALGRSADE AVRALMLAWR DYAKEHPHRY SAMLQSSQPL VDQAAKRLVE ILLGAMRAYG MDEARAVHAV RCLRAAVHGW AVLEAQNAFQ WPEELDESYE LLVRMVTGGL REG
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