Gene Amir_3140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3140 
Symbol 
ID8327330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp3626621 
End bp3627313 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content76% 
IMG OID644943658 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003100898 
Protein GI256377238 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGCGAG ACCTGACCCG CGACCGCATC GTCGCCGCCG CCTACGACCT GCTCCTGCAA 
GGCGGCCGGG AGGCGGTGTC CACGCGCGCG GTGTGCGCGG CGTCCGGGGT CCAGTCGCCC 
ACGATCTACC GCATCTTCGG CGACAAGGAC GGCCTCCTCG ACGCCGTCGC CAGCCACGGC 
TTCGCCTCCT ACCTGGCCGA CAAGACCTCC CTCTCCCACT CCGCCGACCC GGTCGACGAC 
CTGCGCCGGG GCTGGGACCT GCACGTCGGC TTCGGCGTCG CCAACCCCGC CCTCTACTCG 
CTGATCTACG GCGACGCCCG CACCGGCGTC TCCTCGCCCG CCGCCAGGCA GGCCGCCGAC 
GTGCTCGCGG GCACCGTCCG CCGCATCGCC GAGGCCGGAC GGCTCAAGGT CGCCGAGGAG 
CGGGCCGCGC ACCTGGTGCA CTCGGCGGGC TGCGGGCTCA CGTTCACCCT GATCGCGACG 
CCCGAGGACG AGCGCGACCC GGAGCTGTCG ACCACGGCTC GGGAGGCGGT CATCGCCGCC 
GTCACCACCG GGCCCGCGCC GACCGGCGCG CCCGCCGGAC CGGTCGGGGC GGCGATCGCG 
CTGCGGGCCG CCGCGCCGGA GCTGACCGTG CTCAGCGCGG GGGAGCGGGC GCTGCTGGCC 
GAGTGGCTGG ACCGGGTGGT CGCCGAGGCG TGA
 
Protein sequence
MKRDLTRDRI VAAAYDLLLQ GGREAVSTRA VCAASGVQSP TIYRIFGDKD GLLDAVASHG 
FASYLADKTS LSHSADPVDD LRRGWDLHVG FGVANPALYS LIYGDARTGV SSPAARQAAD 
VLAGTVRRIA EAGRLKVAEE RAAHLVHSAG CGLTFTLIAT PEDERDPELS TTAREAVIAA 
VTTGPAPTGA PAGPVGAAIA LRAAAPELTV LSAGERALLA EWLDRVVAEA