| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3111 |
|---|
| Symbol | |
|---|
| ID | 8327301 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 3594753 |
|---|
| End bp | 3595643 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 644943631 |
|---|
| Product | transcriptional regulator, AsnC family |
|---|
| Protein accession | YP_003100871 |
|---|
| Protein GI | 256377211 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATCGCCG AGGTGCTCGG CGTTTCCGAC CGCACCGTCG CCCGCCGGTA CGCCCGGTTG
CGCTCGACCG GAACGCTGCG GGTGGTCGGT GGGGTGGACC CGACCGCGTT GGGCGCGGTG
ATGTGGTTCC TGCGGATTCG CTGCGCGCCC GCCGCCGCGC TCCCCGTCGC CGAGGCGCTG
GCCCGGCGCG CCGACACGTC CTGGGTGAGC ATCGCCTCCG GGGGCGCGGA GATCACCTGC
GCGGTGCGCG CCGAGAGCGC GGCCGACAGC GAGGCGCTGC TGCTGTCCAG GCTCCCCCGC
ACCCCGCGCG TGGAGGGGGT GAGCGCGCAC TCGGTGCTGC ACGCGTTCTA CGGCGGCCCG
GACAACCTGA TCGCCAAGCT CGGGGCGCTG GACGAGGCTC AGGTCGGGCG GTTGCGGCCG
GACCCGGTGC AGCGCAGGCC AGGACCGGTG CGGTTGGACG ACGGGGACCG CGCGCTGCTC
GCCGCGCTCG CCGTCGACGG GCGGACCGGG TTCGAGCGGC TGGCCGCGCT GACCGGCTGG
TCGCCGACCG CGGTGCGGCG GCGGATGGGC GAGCTGCGCG AGCACGGGGT GCTGTACCTG
GACGTCGACG TGGACGCCGC GCTGCTCGGG GTCGGCGCGC GGACGTTGCT GTGGCTCTCG
GTCGCCCCCG CGCACCTTGC GGAGGCCGGG ACGGCGTTGG CGCAGCACCC GGAGGTCGCG
TTCGCGGCGG CCACCACCGG GCCCACGAAC CTCTGCGCGA CAGCGGTGTG CGCGGACCAG
CGCGCGCTGT GCCGGTACCT GACGACGCGC ATCGCCGCGC TGCCCGCCGT GACGCACGTC
GAGACCGCGC CGGTGATCAA GACGCTCAAG CAGGCGGGCA GGCAGCTCTG A
|
|---|
| Protein sequence | MIAEVLGVSD RTVARRYARL RSTGTLRVVG GVDPTALGAV MWFLRIRCAP AAALPVAEAL
ARRADTSWVS IASGGAEITC AVRAESAADS EALLLSRLPR TPRVEGVSAH SVLHAFYGGP
DNLIAKLGAL DEAQVGRLRP DPVQRRPGPV RLDDGDRALL AALAVDGRTG FERLAALTGW
SPTAVRRRMG ELREHGVLYL DVDVDAALLG VGARTLLWLS VAPAHLAEAG TALAQHPEVA
FAAATTGPTN LCATAVCADQ RALCRYLTTR IAALPAVTHV ETAPVIKTLK QAGRQL
|
|---|
| |