Gene Amir_3100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3100 
Symbol 
ID8327290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp3578325 
End bp3579053 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content75% 
IMG OID644943620 
Producthypothetical protein 
Protein accessionYP_003100860 
Protein GI256377200 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.689568 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGGTC TCCTCCGCGT CCTCCTCGTG GCTCTCCTGC TCGGCGTCGT CACCGCTCCC 
CCGGCTTCGG CGGCGCCGCT GGAGATCCGG GACGGGCACG TCGACATCGG GCCCGCGCTG 
GTGGACGGCG CGTGGCAGGT CCGGATCGAG GACGACTCGA CCAGCCCGCC CACGTGGCGC 
GACCCGGCCG GGGTGGTGCT GCGCCTCGGT GACGCCGCGA AGGCCGCCAT CCCGGCCGAC 
CCCGCCTACG CCTTCCTCGG CGAGGCGGGC GAGACCGTGC ACCTGATGCC GCAGACCCGC 
AGGTCCGGGG TGCTGTGGAT CGGCTGGAAC ACCCGGCACG AGAGCGTGCT CGCGCAGCGC 
CCGGAGGCGA TCTCCCTGTC GCTGCACGAC GTCGAGGGGC CGGGACGGCT GCGGGTGTAC 
CTGGACTACG GCGGTTTCCG ACCGCCGAAG ATGGTGTGGG ACAACGAGGA GCTGGCGATC 
GAGGCGGGCA CGCACACCCA CGCGAACTGG GCGTTCACCG CGCCCGGCGA GTACCGCGCC 
CGGTTCACCG CGCGGATCAC CCCGCGCGGG GGCGAGACGG TGGAGGCGAC GTCGACGCTG 
CGCTTCCTGG TCGGGGACGC CACCAGCGCG TCGGCCCGGG AGGACGAGCC GTTCCCGTGG 
GCGGTCGCGG GCGTGGCGGC GGCGCTCTCC CTGCTGGCGG CGGCTTTCCT GCTCAAGCGC 
CGTCGGTGA
 
Protein sequence
MSGLLRVLLV ALLLGVVTAP PASAAPLEIR DGHVDIGPAL VDGAWQVRIE DDSTSPPTWR 
DPAGVVLRLG DAAKAAIPAD PAYAFLGEAG ETVHLMPQTR RSGVLWIGWN TRHESVLAQR 
PEAISLSLHD VEGPGRLRVY LDYGGFRPPK MVWDNEELAI EAGTHTHANW AFTAPGEYRA 
RFTARITPRG GETVEATSTL RFLVGDATSA SAREDEPFPW AVAGVAAALS LLAAAFLLKR 
RR