Gene Amir_3055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3055 
Symbol 
ID8327245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp3530167 
End bp3530736 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content78% 
IMG OID644943578 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003100818 
Protein GI256377158 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.477394 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCCGCAC CACCCCGCAA GCGCTCCGCC GAGGCGACCA GGGCGGCGAT CCTGGACGCC 
GCGCGCGCCC GCTTCGGCGA GGGCGGGTTC GACCGGGTGC GGGTGCGCGA CGTCGCGGCC 
GACGCGGGCG TGGACGCGGC GCTGGTGGTG CGGTACTTCG GCGGCAAGGA GGCGCTGTTC 
GCCGAGGCCG CCGCGTTCGA CCTGCGCCTG CCCGACCTGC GCGGACTGCC GGGGGACCGG 
GTCGCGGCGG TGCTGCTGGA CCGGTTCTTC GCGGTGTGGG AGCACGACGC CGGGTTCCTG 
TCGCTGCTGC GCGCGGCGGC GAGCAGCCCG GCCGCCGCCG AGGCGATGCT GGGGGTGTTC 
ACCGGCCAGG TGGCGCCCGC GCTGGCCGAG ATCGCGGTGG ACCGGCCCGC CGAGCGGGCG 
GCGCTGGTCG GCTCCCAGGT GCTGGGGCTG GCGTTCACGC GGTACGTGCT GCGGGTGCCG 
CCGCTGGCGG CCATGGGGCG TGAGGAGGTG GGGGCGTGGA TCGGACCGGT GCTGGAGCGG 
TACCTGCTGG ACCCGAGCCC GCTCGGCTGA
 
Protein sequence
MPAPPRKRSA EATRAAILDA ARARFGEGGF DRVRVRDVAA DAGVDAALVV RYFGGKEALF 
AEAAAFDLRL PDLRGLPGDR VAAVLLDRFF AVWEHDAGFL SLLRAAASSP AAAEAMLGVF 
TGQVAPALAE IAVDRPAERA ALVGSQVLGL AFTRYVLRVP PLAAMGREEV GAWIGPVLER 
YLLDPSPLG