Gene Amir_2992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2992 
Symbol 
ID8327182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp3460625 
End bp3461191 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content74% 
IMG OID644943518 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003100758 
Protein GI256377098 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.537679 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCAAG ACGAGGGCGA GCTGGACAGC CTGGTGCGCA AGCGCGTCCG CGCCCTGCGC 
CTGGCCCAGG GCTGGTCGCT GGACGACCTG GCCACCCGCG CCAAGCTCAG CCCCTCCACG 
CTCAGCCGCA TCGAGAACGG GCAGCGCAGG CTCGCGCTCG ACCAGCTCGT CACGCTCGCC 
AAGGCCCTCG ACACCTCGCT CGACCAGCTG GTCGAGACCG CCGCCGAGGA CGTCGTGACC 
AGCCCGGTGC ACGACCCGTC CCACCAGGCG CTGCGCTGGG CGCTCCGCGC CGACCCCGGC 
ATGTCCGTCA TCCGCCAGCG CCTGGTCGAC CCGCCGCCCG ACAGCCCGTC ACGGCTGCGC 
GCGCACCCCG GCCGGGAGTG GCTGGTCGTG CTCTCCGGCA CCGCCGTCCT GCTGCTCGGC 
AACCGCACCT ACCGCATCGA GACCAACCAG GCCGCCGAGT TCCCGACCAT GCTCCCGCAC 
GCTCTCGGCG CGCTCGGCGG ACCGGCCGAC ATCCTCGGCA TCTTCGACCG CGACGCCCGC 
CGCAGCCACC AGTCCGGCCA GGAGTGA
 
Protein sequence
MTQDEGELDS LVRKRVRALR LAQGWSLDDL ATRAKLSPST LSRIENGQRR LALDQLVTLA 
KALDTSLDQL VETAAEDVVT SPVHDPSHQA LRWALRADPG MSVIRQRLVD PPPDSPSRLR 
AHPGREWLVV LSGTAVLLLG NRTYRIETNQ AAEFPTMLPH ALGALGGPAD ILGIFDRDAR 
RSHQSGQE