| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2945 |
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| Symbol | |
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| ID | 8327134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 3400854 |
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| End bp | 3402623 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644943471 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_003100712 |
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| Protein GI | 256377052 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.703955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGGCA CCGAGGAAGG GCGCGCGTTC GCGGCCAGCG CCGTCGTCGC GGGCGGCGGG
CCGGTCCAGC CGCCGTGGGA CGACGAGCTG GTCAGCTGCG TGGTGGACGA GAACGTCGGC
CTGCCGGACG TGGCCGTGCT GACCTACCGC GACGGCTCGC ACGAGATGCT CAAGGACACC
GGGATCACGC TCGGCTCGCC GCTGGAGGTG TCGGTCGCCT CGGCCCGCAC CAACGCGAAG
GAGCTGCTGT TCCGGGGCGA GGTCACCTCG ATCGAGCTGG AGGTCGACGG CACCGGCTCG
TACACGGTGC TGCGGGCCAT GAACCGCGCG CACCGGCTGC TGCGCGGGCG CCGCGTCGAG
GCGTTCCACG AGATGAGCGC GACCGCGATC ATCCGCAAGG TCGCCAAGAA CGCCGGCCTC
ACCGTCGGCA AGGTCGAGGC CGCGCCGATC ACCTACCAGC ACATCAGCCA GGCGGGCGTC
TCGGACTGGG ACTTCCTGCA GACGCTGGCC CGCGAGCACG GCACGCTGGT GCGCGTGGAC
GACAAGGGCG TGCTGGACTT CGTCAAGCCC GAGCCCGCGT CCAAGGCGCC CGCGCCCACC
ACGTCGGCGG AGAAGAGCCC GTACGTGCTG GAGTACGGGC GCAACCTGAT GGCGCTGCGC
GCGGTCCTGG GCACCAGCGA GCAGACCGGC GGCGTGGAGG TGCGCGGCTG GAACCAGGCC
ACCAAGAGGG AGATCGTGGC CACCCGCAAG CCGCAGCCCA GCAAGACCGT CGTGCCCGGC
CTGCTCGCCA CCAAGGCCGC CAAGCTCACC TCCGGCGGCA AGCTGCTGGC CGCGGGCACC
CCGTACGCCA CGCAGGCCGA GGCCGACGCC GCAGCCAAGG CCCTGGAGGA GTCGCTGAGC
GCGGGCTACG GCGAGCTGGA GGCCGTGGTG GAGGGCAACC CGCAGCTGCG CGCGGGCATC
CCGATCGCGC TGGGCAACGT CGGCGCGGCG TTCAGCGGGC GCTACACCGC CACCGCCGTC
ACGCACGTCA TCGAGCCGAA CCGGGGCTAC CGCACCACCG TGCTCGTCAG CGCCTCCGCC
GACCGCTCGT TCGCGGGCCT CGTCGCCCAC GACTCCATCC CGTCCAGGGG CCCGAGGATG
CCGGGCCTGG CCATCGCCGA GGTCACCGAC ATCAAGGAGA CCGGCAACGG CGAGCGCGGC
TGGGTGCGGC TGAGGTTCCC GTGGCTGGAC GACAAGTACG TCTCCGACTG GGTGCGCACC
GTGCAGCTCG GCGGCGTCGC GGGCGGCGGC GTGTTCAGCC CCGACGTCAA GGACGAGGTC
CTGGTCGGCT TCGAGCAGGG CAGCCTCGAC CGGCCCTACG TGCTCGGCGG GCTCTACAAC
GGGGTGGACA AGCCGTCCAA GCACGACCAG AAGCTCGTGG ACGGCCGCAG CGGCAAGGTC
AACCGCCGCT CCCTGGTCAA CCGCAAGGGC GACCGGCTCG AACTGCTCGA CGGCGCCGCC
GCGCAGGGCG TGCGGCTCGG GTCCGGCGAC GACAAGCTCG AAGTGGTGCT GGACCGCAAG
AAGAACGAGC TGCGGCTGAT CCAGGGCGGC CGGACCGGCG GGTGCAGCAT CACGCTCTCC
CGCACCGGGG TCGAGATCGA CGCCGGTCGC GGCGGGATCA CGCTCAAGGC GGGCCGCAAG
GTCGACGTCT CGGCCAGGAC CGGCGTCGAC ATCGACACCG GCTTCACCGG CGACGTCGTC
GTCAAGGGCC GCACCATCCG GCTCAACTGA
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| Protein sequence | MSGTEEGRAF AASAVVAGGG PVQPPWDDEL VSCVVDENVG LPDVAVLTYR DGSHEMLKDT
GITLGSPLEV SVASARTNAK ELLFRGEVTS IELEVDGTGS YTVLRAMNRA HRLLRGRRVE
AFHEMSATAI IRKVAKNAGL TVGKVEAAPI TYQHISQAGV SDWDFLQTLA REHGTLVRVD
DKGVLDFVKP EPASKAPAPT TSAEKSPYVL EYGRNLMALR AVLGTSEQTG GVEVRGWNQA
TKREIVATRK PQPSKTVVPG LLATKAAKLT SGGKLLAAGT PYATQAEADA AAKALEESLS
AGYGELEAVV EGNPQLRAGI PIALGNVGAA FSGRYTATAV THVIEPNRGY RTTVLVSASA
DRSFAGLVAH DSIPSRGPRM PGLAIAEVTD IKETGNGERG WVRLRFPWLD DKYVSDWVRT
VQLGGVAGGG VFSPDVKDEV LVGFEQGSLD RPYVLGGLYN GVDKPSKHDQ KLVDGRSGKV
NRRSLVNRKG DRLELLDGAA AQGVRLGSGD DKLEVVLDRK KNELRLIQGG RTGGCSITLS
RTGVEIDAGR GGITLKAGRK VDVSARTGVD IDTGFTGDVV VKGRTIRLN
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