| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2899 |
|---|
| Symbol | |
|---|
| ID | 8327088 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 3343645 |
|---|
| End bp | 3345093 |
|---|
| Gene Length | 1449 bp |
|---|
| Protein Length | 482 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 644943431 |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_003100672 |
|---|
| Protein GI | 256377012 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.996179 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCTGC CGTTGGCGGA CCTGCTGATC ACGGGCGGTT CGGTCCTGCC CGGCGACCCC
CGCGACGGGC GCTTCGCACG GGCCGACGTG CTCGTGCGGG ACGGCCTGAT CGCCGCGATC
GGCCCCGACC TGGAGGCGCC GGGCGCCGAG CGGGTCGACG CGACGGGCGC GTTCGTGCTG
CCGGGTTTCG TGGACACCCA CCACCACCTG TGGGAGGCGT CGCTGCGCGG CCTGACGGCG
GACTGGAGCG CGCTGGACTT CTTCTGGGGC GTCAGGGCCC ACCACGCCGG GGCGCACGAG
GCGCGGGACG TGCACGCCGG GACGTACGCG GGCGCCGTGG CCGCGCTGGA CGCGGGCATC
ACCACCGTCC TGGACGCCGC GCACGCGGTG AACACCCCCG AGCACGCCCG CGAGGGCCTG
CGGGCCGTGC GGGAGTCGGG CGTGCGCGCC CTGTTCTGCT ACGGCCTGAC CACGACGCCG
GGCGCGGAGG CGTTCACCGC CGAGCAGCGG CTGGCGGACC TGCGCGCCCT GCACGCGAAC
GAGTTCACCT CCCAGAACGC CGCAACCCGC GTCCGCCTGG GGGTGGCCGT GAACGACATC
GGCTCGGTAC CGTGGACCCG GACCCGCACC GAGTTCCACC TGGCCCGCGA ACTCGGTCTG
CCTTCGACGG TCCACTCGCG CTCCCTGTGG GGCGAGCTCA GCGCGCCCGA GATCACCTGG
CTGCACCGCG ACGGCCTGCT GGCAGCGGAC CAGGTGCACG CCCACGCCAA CGCGGCCACC
GACGGGGAGC TGGCCCTCCT CGCCGAGGCG GGCGCCGCCG TGTCCAGCAC GCCGGAGACC
GAGGTGATGC TGGGCCTTGG CTACCCCGCG CTGGCGAGGG CCGCCGAACT GGGCATCCCC
ACCGGTCTGG GCACGGACAT CCAGGCGGGC AGCCCGGCGG ACCCGTTCGC GTGGATGCGC
GCGGCCCTGC AGGCGGTCAG GGGCCAGCGG CACCAGCGCG TCCTGGAGAC CGGGGGCAGC
ACGGGCCTGG GCACGCCGAC GCCGTCGGTG CGCGACGTCC TGCACCACGC CACCCTGGGC
GGCGCGCGGG CACTGGGCCT GGGCGGGGTG ACCGGTTCGC TGGAGGTCGG CAAGGCGGCG
GACGTGCTGG TGCTGCGGAC GGACGGGGTC CACCAGCGCC CGGTGGTCGA CCCGGTGGCG
ACCGTGGTGC TGCACTCGCG GGCGAGCGAC GTGGACACCG TGCTGGTGGC CGGCGAGGTG
GTGAAGCGCG CCGGCCTGCT GCTCGGCGGC CGAGCCGACC GCGCGACCGA CCTGGCGGAC
ACGACGTGGG CCCGCCTGAC CCCGAGGATC ACCTCCCGAG GCGGCCTCCT CCCGCCGCGC
CCGGAAGGCG TCCTGAAGCA CATGGCGGCA GCGGGGGCGG CGAACGCGCC GGAGTGGGCG
AGGAGCTGA
|
|---|
| Protein sequence | MPLPLADLLI TGGSVLPGDP RDGRFARADV LVRDGLIAAI GPDLEAPGAE RVDATGAFVL
PGFVDTHHHL WEASLRGLTA DWSALDFFWG VRAHHAGAHE ARDVHAGTYA GAVAALDAGI
TTVLDAAHAV NTPEHAREGL RAVRESGVRA LFCYGLTTTP GAEAFTAEQR LADLRALHAN
EFTSQNAATR VRLGVAVNDI GSVPWTRTRT EFHLARELGL PSTVHSRSLW GELSAPEITW
LHRDGLLAAD QVHAHANAAT DGELALLAEA GAAVSSTPET EVMLGLGYPA LARAAELGIP
TGLGTDIQAG SPADPFAWMR AALQAVRGQR HQRVLETGGS TGLGTPTPSV RDVLHHATLG
GARALGLGGV TGSLEVGKAA DVLVLRTDGV HQRPVVDPVA TVVLHSRASD VDTVLVAGEV
VKRAGLLLGG RADRATDLAD TTWARLTPRI TSRGGLLPPR PEGVLKHMAA AGAANAPEWA
RS
|
|---|
| |