| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2898 |
|---|
| Symbol | |
|---|
| ID | 8327087 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 3342548 |
|---|
| End bp | 3343396 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644943430 |
|---|
| Product | transcriptional regulator, MerR family |
|---|
| Protein accession | YP_003100671 |
|---|
| Protein GI | 256377011 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0789] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGTTCC TCTCAATCAG CGAGTTCAGC GAGATGTGCG CGCTCCCCGC CCAAACCCTG
CGCTTCTACC ACTCCGAGGG CCTGCTGGTC CCGGCCCACG TCGACGAGCG AACCGGTTAC
CGCTCGTACG ACTTCGTCCA GGTCGAACAA GCCATGCTGA TCAGCACCCT GCGCGGAGCC
GGACTCAGCG TCCGGCACGT ACGCCAGGCC CTGGACGCCC CCGACACCGC GCTCGGGTTG
CTCACCGAGC ACCGGGAGTC GTTGCTGCGC AAGCGAAAGC TGGAGGACGA GGCGCTGCGG
GACGCGGAGG TGTTCGTCTC CGACTGGCCG CAGGTGCGCG AGCACGCCGT CCCCGAGATC
ACCGCGCTCC GGACGATGGT GCCGGGAAGC AGGCACGAGG ACGTGCTCGC GGAACGGGTC
TCGGCCGCAG TTGACCGACT CCGCCGGATC GCGGTGGACG CAGGCGCGGA GGTCTCCGGA
CCGCCGTGGA AGCAACACGC CCTGGAAACC CAGGAGCAGA AGGCGAAGAC CATGGACCCG
GACGGGAACG ACCTGTTCGT CGCACTGCCC CTGCTCACTC CGATCACCCC CGACTCCCTG
CCCGCCGACG TCCACACCCA CGTCCTCGAA GCGCACGAGG AGGTGTCGAT CGTGCTACCG
GGCAGGGACA CGCTGCCGAG GCTGGGCGCG GTGTTCAACC GCCTGGTGGA CCACTCGGCG
CGCGTCAACC GGATGGTCGC CTTCTGGTCC CCCCGCTACC TGCTGCACGA GGGCAGCGTG
GAGATCTCGG CGACGGTCAC CGACTTCGAG GAGGGCGAGA CCTTCGAGGA CGACCTCCCC
GACCAGTGA
|
|---|
| Protein sequence | MVFLSISEFS EMCALPAQTL RFYHSEGLLV PAHVDERTGY RSYDFVQVEQ AMLISTLRGA
GLSVRHVRQA LDAPDTALGL LTEHRESLLR KRKLEDEALR DAEVFVSDWP QVREHAVPEI
TALRTMVPGS RHEDVLAERV SAAVDRLRRI AVDAGAEVSG PPWKQHALET QEQKAKTMDP
DGNDLFVALP LLTPITPDSL PADVHTHVLE AHEEVSIVLP GRDTLPRLGA VFNRLVDHSA
RVNRMVAFWS PRYLLHEGSV EISATVTDFE EGETFEDDLP DQ
|
|---|
| |