Gene Amir_2879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2879 
Symbol 
ID8327068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp3321789 
End bp3322469 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content75% 
IMG OID644943412 
Productregulatory protein TetR 
Protein accessionYP_003100653 
Protein GI256376993 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGCCCA TGACGAGCGG GGCACAGCGG GGGAGGCGGC GCGCCGACGC GCTCTCGAAA 
GAGCGGATCG TCGAGGCCGC GATCGGGATC CTCGACGCGG AGGGCGAGAA GGCGCTGACG 
TTCCGCGCGC TCACCACCCG GCTCGCGACC GGCGCGGGGG CCGTCTACTG GCACGTCGCG 
AACAAGGACG AGCTGCTCGC CGTGGCCACG GGCGACGTCG TCGGCCGCGT CCTGGCCGGG 
GTGCGGGGCG GTGCGGACCC CGAGGAGGAC GTCCGGGTCC TCGCGCTCGG GCTGTTCGAC 
GCGATCGACG CGCACCCCTG GGTCGGGGCC CAGTTCGCCC GCGAACCGTG GCAGCCCGCC 
CTGCTGGACG TCTTCGAGGC CATCGGCGGG CTGGTCGCCG CGCTGGGCGT GCCCGAGCGG 
GCGCAGTTCG ACTGCGCGTC CGCGCTCGGC AACTACGTCC TCGGCGTCGC CGGGCAGAAC 
GCCGCCAACG CCCGCCTCGC CCCGAAGGGG GTGGAGCGGG CGGAGTTCCT GGAGACCATC 
GCCGAGCGGT GGCGGCGGCA CGACCCCGAG CTGCGCCCGC ACGCGCACCG GATGGCGGCG 
CACCTGGTCG AGCACGACGA CCGGGCGCAG TTCCTCGCCG GGATCAACCT GATCCTGGCG 
GGCATCGCGA CCATCCGGTA G
 
Protein sequence
MVPMTSGAQR GRRRADALSK ERIVEAAIGI LDAEGEKALT FRALTTRLAT GAGAVYWHVA 
NKDELLAVAT GDVVGRVLAG VRGGADPEED VRVLALGLFD AIDAHPWVGA QFAREPWQPA 
LLDVFEAIGG LVAALGVPER AQFDCASALG NYVLGVAGQN AANARLAPKG VERAEFLETI 
AERWRRHDPE LRPHAHRMAA HLVEHDDRAQ FLAGINLILA GIATIR