| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2854 |
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| Symbol | |
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| ID | 8327043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 3287324 |
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| End bp | 3288427 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644943388 |
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| Product | putative spermidine/putrescine-binding periplasmic protein |
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| Protein accession | YP_003100629 |
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| Protein GI | 256376969 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0404932 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAACT TCTCCCCGTC CCGGCGGAGC TTCCTCCGCG CGACGGCCTT CGCGGGCCTC
GCGGCGGGCC TGGCCGCCTG CGGCACGCCG GGCGGCTCGT CCTCGTCCTC GCCGTCGGGG
GCGACGAAGC TGACGATGTT CCACTGGGCC GGTGCGCAGG GCACGGTGCC CAAGCAGGTC
GGCGAGGCGT TCGCCAAGGC CAGCGGCGTC GACCTGAGCT ACATCGAGGG CACCAACGCC
GACACCTTCC CCAAGCTGGT GTCGTCGGTG CAGATCAACC CGAACAGCCC GCTGCTGAAC
CTCGGCTTCT TCAACCCGCA GAGCTTCGCC CAGGGCGGCG CCGGTGACCT GTGGCTGCCC
GTGCCGGACT CGGTCACCAA CGCCGACAAG GTCAACAGCG CCTACAAGAT CGCCGATCGC
AGGGGCGCGT ACCTGGTCAT GGACGCGATG GGCCTGGTCT ACAACAAGAA CGCCTTCCCG
GACGGCCCGC CCAAGAGCTG GATGGAGCTG TTCAACAGCG CCCACCGGGG CAAGGTGACC
ACCTGGGACG CGCCGTCGTT CAGCGTCAAC GCGCTCCCGG TGATCTCCAA GCTCAACGGC
GGCAGCGAGA CGAACTTCCA GCCCGGCATC GACGTGTTCG GCCGGGCCGC GCGCGACGGC
CAGTTCCGCG GCTTCATCTC CTCGCTGGAC GCGCTGCGCC AGCAGCTCAA CTCGGGCGAG
GTCGTGATCG CCCCCGGCTT CCAGGGCGTG GCCGAGCCGT GGATCAAGGC GGGCGACCCC
ATCGGGTTCG CGGTGCCCGA GGAGGGCGTG ATGGCGTTCC CCGAGGGCTT CCAGATCGTC
AAGGGCTCGA CCGACGCGCA GGTGCAGGCC GCCGCGAGGC TGATGAACGA CCTGTTCGAC
CCGGCGCAGG TCAGCGCGTA CTGCGCCGCC ACCGGCACGA TCCCGCTGGT GGACGGCGCG
ACCCTGGCCC CGGAGTACGC CGACCGCGCG AGCTTCCAGC TGTCCACCGT GGAGGGCGCG
ATCAAGCTGG ACTGGAACGC GCTGGTCGCC AGTCTCAAGG ACGCCACGAC CGCGTGGAAC
AACGACGTCA AGGCCAACAT CTGA
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| Protein sequence | MNNFSPSRRS FLRATAFAGL AAGLAACGTP GGSSSSSPSG ATKLTMFHWA GAQGTVPKQV
GEAFAKASGV DLSYIEGTNA DTFPKLVSSV QINPNSPLLN LGFFNPQSFA QGGAGDLWLP
VPDSVTNADK VNSAYKIADR RGAYLVMDAM GLVYNKNAFP DGPPKSWMEL FNSAHRGKVT
TWDAPSFSVN ALPVISKLNG GSETNFQPGI DVFGRAARDG QFRGFISSLD ALRQQLNSGE
VVIAPGFQGV AEPWIKAGDP IGFAVPEEGV MAFPEGFQIV KGSTDAQVQA AARLMNDLFD
PAQVSAYCAA TGTIPLVDGA TLAPEYADRA SFQLSTVEGA IKLDWNALVA SLKDATTAWN
NDVKANI
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