Gene Amir_2843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2843 
Symbol 
ID8327032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp3274711 
End bp3275091 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content73% 
IMG OID644943377 
ProductEndoribonuclease L-PSP 
Protein accessionYP_003100618 
Protein GI256376958 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTGAGC CACCCTCGGT CCGCAGGCAC TCCGACCCGC TCGGGCGGTA CGCGGAGAGC 
GTCGAGATCA GCGGCGCCTC GCGGGTGCTG TTCATCAGCG GGCAGGTCCC CACGGACGTC
GACGGGACCG TGCCCGCCGG GTTCGCCGAG CAGTGCCGCA ACGCCTGGCA GCGGGTGCTG
GCCGTGCTGG AGCAGCACGA CATGCGGCCC GAGCACCTGG CCAAGGTGAC CACGTTCCTG
CGCGACCGGG GCGACCGGGA GCTCAGCGGC GAGGTGCGCG GGCAGGTGCT CGGCGAGCAC
CTGCCCGCGC TGACCGTGGT CGTGGCCGAG CTCTACGAGC CGGACTGGTT GGTGGAGATC
GAGGCCATCG CGCTGGCCTG A
 
Protein sequence
MREPPSVRRH SDPLGRYAES VEISGASRVL FISGQVPTDV DGTVPAGFAE QCRNAWQRVL 
AVLEQHDMRP EHLAKVTTFL RDRGDRELSG EVRGQVLGEH LPALTVVVAE LYEPDWLVEI
EAIALA