Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2824 |
Symbol | |
ID | 8327013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 3252503 |
End bp | 3253411 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644943359 |
Product | ABC transporter related |
Protein accession | YP_003100600 |
Protein GI | 256376940 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGCGACC CGGCGTACGA GCTGCACGAG GTCACGAAGT CCTTCAAGGG CAAGGAAACC CCCGTCAACG ACCGGATCTC GCTCACCGTC GCCCGAGGCG AGTTCTTCGG CCTGCTCGGC AGCAACGGCG CGGGCAAGAG CACCCTGATC AAGCAGATGG TCGGCCTGCT GCGCAGCGAC TCCGGCACCG TCCGGTTCCT CGGCCGCCCG GTGCCGGGCA ACCACGCGTT CACCAGCGCC CGGCTCGGGT ACATGCCGCA GAGCGCGTTC GCCCTCAACA ACCTCACCGT CGCCGAGGCG GTCTACTACA CCGCCCACCT GCGCGGGACG CCCACCCGCG AGGCCAGGCG GCAGCGCGAC GAGCTCGTGG AGCGGCTGGA GCTCGTCCCC CTGCGGGACA AGGTCGCCCG CCAGCTCTCC GGCGGCGAGC GGCGGCTGCT CCAGCTGGCC GTGGCGCTGG TGACCGACCC GCCGGTGCTC ATCCTGGACG AGCCCACCAA CGAGCTGGAC CCCGCGCGCA GGCGGCAGGT GTGGGCGCTG CTGCGCGAGG CCAACCGGGA GCGCGGCCGG ACGATCGTGC TGATCACGCA CAACGCGCTG GAGGCCGAGC AGGTGATCGA GCGGGTCGGG ATCATGAGCG GCGGCCGGAT GGTCGCGCTC GGCAGGCCCG GCGAGCTGAA GAGCCGCGTG GCGGGCAGCT TCCGGCTCGA CGTGACCTTC CGCGAGGAGG GCGGCAGGGC GCTGCCGGAC TACGTCGTGG TGGAGAGCAG GCACCGCGAC CGCGTCACCG CGCACGTGGC CGCCGCCGAC GTCGCCCGCC TCACCGCGGA CCTCGCGCCG GAGAGCGTCC TGGAGTTCCG ACTGCAGTCC GCGACCTTGG AAGACGTGTA CCTGGACCAT GTCCGCTGA
|
Protein sequence | MSDPAYELHE VTKSFKGKET PVNDRISLTV ARGEFFGLLG SNGAGKSTLI KQMVGLLRSD SGTVRFLGRP VPGNHAFTSA RLGYMPQSAF ALNNLTVAEA VYYTAHLRGT PTREARRQRD ELVERLELVP LRDKVARQLS GGERRLLQLA VALVTDPPVL ILDEPTNELD PARRRQVWAL LREANRERGR TIVLITHNAL EAEQVIERVG IMSGGRMVAL GRPGELKSRV AGSFRLDVTF REEGGRALPD YVVVESRHRD RVTAHVAAAD VARLTADLAP ESVLEFRLQS ATLEDVYLDH VR
|
| |