Gene Amir_2824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2824 
Symbol 
ID8327013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp3252503 
End bp3253411 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content72% 
IMG OID644943359 
ProductABC transporter related 
Protein accessionYP_003100600 
Protein GI256376940 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGACC CGGCGTACGA GCTGCACGAG GTCACGAAGT CCTTCAAGGG CAAGGAAACC 
CCCGTCAACG ACCGGATCTC GCTCACCGTC GCCCGAGGCG AGTTCTTCGG CCTGCTCGGC
AGCAACGGCG CGGGCAAGAG CACCCTGATC AAGCAGATGG TCGGCCTGCT GCGCAGCGAC
TCCGGCACCG TCCGGTTCCT CGGCCGCCCG GTGCCGGGCA ACCACGCGTT CACCAGCGCC
CGGCTCGGGT ACATGCCGCA GAGCGCGTTC GCCCTCAACA ACCTCACCGT CGCCGAGGCG
GTCTACTACA CCGCCCACCT GCGCGGGACG CCCACCCGCG AGGCCAGGCG GCAGCGCGAC
GAGCTCGTGG AGCGGCTGGA GCTCGTCCCC CTGCGGGACA AGGTCGCCCG CCAGCTCTCC
GGCGGCGAGC GGCGGCTGCT CCAGCTGGCC GTGGCGCTGG TGACCGACCC GCCGGTGCTC
ATCCTGGACG AGCCCACCAA CGAGCTGGAC CCCGCGCGCA GGCGGCAGGT GTGGGCGCTG
CTGCGCGAGG CCAACCGGGA GCGCGGCCGG ACGATCGTGC TGATCACGCA CAACGCGCTG
GAGGCCGAGC AGGTGATCGA GCGGGTCGGG ATCATGAGCG GCGGCCGGAT GGTCGCGCTC
GGCAGGCCCG GCGAGCTGAA GAGCCGCGTG GCGGGCAGCT TCCGGCTCGA CGTGACCTTC
CGCGAGGAGG GCGGCAGGGC GCTGCCGGAC TACGTCGTGG TGGAGAGCAG GCACCGCGAC
CGCGTCACCG CGCACGTGGC CGCCGCCGAC GTCGCCCGCC TCACCGCGGA CCTCGCGCCG
GAGAGCGTCC TGGAGTTCCG ACTGCAGTCC GCGACCTTGG AAGACGTGTA CCTGGACCAT
GTCCGCTGA
 
Protein sequence
MSDPAYELHE VTKSFKGKET PVNDRISLTV ARGEFFGLLG SNGAGKSTLI KQMVGLLRSD 
SGTVRFLGRP VPGNHAFTSA RLGYMPQSAF ALNNLTVAEA VYYTAHLRGT PTREARRQRD
ELVERLELVP LRDKVARQLS GGERRLLQLA VALVTDPPVL ILDEPTNELD PARRRQVWAL
LREANRERGR TIVLITHNAL EAEQVIERVG IMSGGRMVAL GRPGELKSRV AGSFRLDVTF
REEGGRALPD YVVVESRHRD RVTAHVAAAD VARLTADLAP ESVLEFRLQS ATLEDVYLDH
VR