Gene Amir_2820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2820 
Symbol 
ID8327009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp3248640 
End bp3249332 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content76% 
IMG OID644943355 
ProductLmbE family protein 
Protein accessionYP_003100596 
Protein GI256376936 
COG category[S] Function unknown 
COG ID[COG2120] Uncharacterized proteins, LmbE homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGGCGC TCGTCATCGC CGCCCACCCC GACGACGAGG TGCTGGGCGC GGGCGCGACC 
ATGGCGGCCC TCGCCGAGCG CGGGCACCAC GTGTGCGCGC TGATCCTGGC CGAGGGCGTG 
TCGTTGCGGC ACAAGGACGT CGACCTGGCG CGGGCGCGCG AGACGTGCCG GACCGCCGCC 
GCCGAGCTGG GCGTCGCGGA GCTGAGGTTC GGCGGGTTCG CCCTGGAGGG CGGGATGCTC 
GGCGACGGGC CGCAGCGGTC GGTGGTCGAC GCGGTCACCG GCGCGATCCG CGAGGTGGAG 
CCGGAACTGG TGTTCACCCA CCACCCCGGC GACGTCCACG TCGACCACCG GGTGGTGGCG 
CGCTCCACCA CGTACGCCAC GCGCGTGCTC GGCGGCGGGC CGGTGCGGCA GGTGCTGCAC 
TACGAGGTGC TGTCCTCCAC CGAGCAGCAG ACCCCGGCCG CCATCCCCTA CCTGCCCACG 
GTCTTCTACG ACGTCAGCGG GCACGTGGAG CGCAAGTGCC GCGCCCTGTC GGCGTACAGC 
TACGAGGTGT TCGACGCGCC GCACCCGCGC TCGGCGCACG CGGTGCGCGC GCTGGCCGCG 
TACCGGGGCG CGCAGGTCGG GGTCGCGGGC GCGGAGGCCT TCGCGCTGGC GCGGGAGCTG 
CGGGGAGGTG ACGGGGCTTG CGCGTCCTGG TGA
 
Protein sequence
MRALVIAAHP DDEVLGAGAT MAALAERGHH VCALILAEGV SLRHKDVDLA RARETCRTAA 
AELGVAELRF GGFALEGGML GDGPQRSVVD AVTGAIREVE PELVFTHHPG DVHVDHRVVA 
RSTTYATRVL GGGPVRQVLH YEVLSSTEQQ TPAAIPYLPT VFYDVSGHVE RKCRALSAYS 
YEVFDAPHPR SAHAVRALAA YRGAQVGVAG AEAFALAREL RGGDGACASW