| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2819 |
|---|
| Symbol | |
|---|
| ID | 8327008 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 3247288 |
|---|
| End bp | 3248643 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 644943354 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_003100595 |
|---|
| Protein GI | 256376935 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGGTTC TCGTCACCGT CTCGGACCAG GCTTGGGGCG GCAAGCACCG GTACACGCTC
GACGTGGCGG CCGGGTTGCG CGCCGCGGGC CACGACGTCG TGCTGGCCGC CGAGCGCGGT
GGCCGCGCGC TGGACGCCTG GCCGGAACCC GTTGCGGCGC CGGTGTTCCG CGACCACCCG
GAGGAGGCCG CCGCCGTGCT GCGCGAGCGC GTCGGAGCGC CGGACGTGGT CTGCGCGACC
GGCAGGCACG ACGCGGCCGT CGTCCGCGGG CTGCTGCGCG AGGACGGGTG GCCCAGCGCG
CTGGTGCTGT TCCGGCACTC GGCGTTCCCG CTGGAGCAGG GGGAGGGCAC GCGCTGGCTG
CTGGACCGCG CCGGGCTGGT CGTCGCCACC TCGTGGGAGC AGGCGCGGAC CCAGTTCGGC
GACCTCGTGG CCGCGCGCGA CCCGAGGCTG CTGGTGCTGC TCAGCGGGGT CAGGGCGGGG
CTCGCCGACG CCGTCGCCGC GCTGGACCGC GACCGGCTGC GCGCCGACCT CGGCATCGCG
CCGGGGCAGT GCGCTTTCGC CGTGCTCGCA CGGCTCTCCT GGGAGAAGGG GATCGACCGG
CTGCTCAGGG CGTTCGCCCT CGTGGCCGTC GACCCTGCGC CGGTGCTGCT CCTCGTGGGC
GAGGGCGAGC AGCGCGCCGA GCTGGAAGCG CTCGCCGCGA GCGCCGGGAT CGCCGACCGG
GTCCGGTTCC TCGGCCACCA CGACGACGTC CTGCCGGTCC TCGCCGCCGC CGACGCCGCC
GTGCTCGCCA GCACCGTCCC GGAGACGGGA CCGCTGGCGC TCAAGGAGTC CATGGCCGCC
GGGCTGCCGG TGGTCGCCCC CGCGATCGGC GGCATCCCGG AGTTCGTCAC CGACTCGTGC
AGCGGCCTGC TCTTCGCCGA CGACGACGGG CTGCGCGACG CGCTGACCCG CCTGGCGTCC
TCCGAGCGGC TGCGCGAACT GCTCGGCCGG GGCGCCAGGG CGGCGATCGA GGAGGGGCAC
CGGCTCGACC GGCGCGTCGA GCACCTGCTG TGGCGGCTGG ACCTGCTGCT CGCCGAGCGG
GGCGACGTGG ACCGGTTGCT GGGCGAGCTG TCCTGGGACG AGGTGCGGTT GCGGCGCGAG
GCGGACACGG GGTTCGTGTT CGTGCCGCGC ACCTCCTACC TCGCCGAGCT GGACGCCGCC
ACCCACGCCG ACGTCGCGCA GGCGGTGCGG GCCGGTGATC CGGCGCTGCT GCTCGGAACC
GGGTCGCACC CCCGGCGCGC GCTGGTCGAC CAGCTCTACC GGATGGGCGC GCTGCGCCGC
GCCGACACCG CCGCAGCGCT GGTCGCGACC GCATGA
|
|---|
| Protein sequence | MRVLVTVSDQ AWGGKHRYTL DVAAGLRAAG HDVVLAAERG GRALDAWPEP VAAPVFRDHP
EEAAAVLRER VGAPDVVCAT GRHDAAVVRG LLREDGWPSA LVLFRHSAFP LEQGEGTRWL
LDRAGLVVAT SWEQARTQFG DLVAARDPRL LVLLSGVRAG LADAVAALDR DRLRADLGIA
PGQCAFAVLA RLSWEKGIDR LLRAFALVAV DPAPVLLLVG EGEQRAELEA LAASAGIADR
VRFLGHHDDV LPVLAAADAA VLASTVPETG PLALKESMAA GLPVVAPAIG GIPEFVTDSC
SGLLFADDDG LRDALTRLAS SERLRELLGR GARAAIEEGH RLDRRVEHLL WRLDLLLAER
GDVDRLLGEL SWDEVRLRRE ADTGFVFVPR TSYLAELDAA THADVAQAVR AGDPALLLGT
GSHPRRALVD QLYRMGALRR ADTAAALVAT A
|
|---|
| |