| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2783 |
|---|
| Symbol | |
|---|
| ID | 8326972 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 3210249 |
|---|
| End bp | 3211157 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 644943321 |
|---|
| Product | threonine dehydratase |
|---|
| Protein accession | YP_003100562 |
|---|
| Protein GI | 256376902 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1171] Threonine dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCACGA GGTCGGAGGT CGACGCCGCC GCGCGGCGGA TCGGCGGTCG GGTGCGGCGC
ACCCCGGTGT TCCAGCCGCT GGACGGGCTG TGGTTCAAGC TGGAGCACCT CCAGCGCACC
GGTTCGTTCA AGGCCAGGGG CGCGTTCAAC CGCCTGCTGT CGGCGGGCGA CGTGCGCGGC
GCCGAGGTCG TGGCGGCCTC GGGCGGCAAC GCCGGGCTGG CCGTGGCCGA CGCGGCGGCC
GAGTGCGGCG CGACCGCGCG GGTGTTCGTG CCGACCACCG CGCCGCAGGT CAAGGTGGAC
CGCCTGCGCG CGCTCGGCGC GACCGTGGAG CAGGTGGGGG ACCGGTACGC CCAGGCCTAC
GAGGCGGCGA CCGAGTACGC CGACCGCCGC GGCGCGCTGC TCTGCCACGC CTACGACCAG
CCGGAGGTCT GCGCAGGTCA GGGCACCCTG GCGCTGGAGC TGCTGGAGCA GACCGGCGGC
GTGGACACCG TGCTGGTCGC GGTCGGCGGC GGCGGTTTGA TCGCCGGGAT CGCGGCGGCG
CTGGAGGGCG TGGCCAAGGT CGTCGCCGTC GAGCCGCGGA CCGCCCCCAC CCTGCACTCC
GCGCTCGCCG CGGGCGAACC GGTCGACGTC CGGGTCGCAG GCGTCGCCGC CGACTCGCTC
GGCGCCAGCC GGGTCGGCGA CATCGCGTTC GCCGTGGCCC GCCGCACCGG CGTCGAGTCC
CTGCTGGTCG ACGACCAGGC CATCACCGAC GCCCGCGGGC TGCTGTGGTC CGAGTACCGC
CAGGCCCTCG AACCGGGTGG CGCCACCGCC TACGCCGCGC TGCTCGGCGG CGCCTACCGC
CCCGAGTCCG ACGAGCGCGT CGCCGTGGTC CTGTGCGGCG CCAACACCAA CCCGGCCGAC
CTGGCCTGA
|
|---|
| Protein sequence | MITRSEVDAA ARRIGGRVRR TPVFQPLDGL WFKLEHLQRT GSFKARGAFN RLLSAGDVRG
AEVVAASGGN AGLAVADAAA ECGATARVFV PTTAPQVKVD RLRALGATVE QVGDRYAQAY
EAATEYADRR GALLCHAYDQ PEVCAGQGTL ALELLEQTGG VDTVLVAVGG GGLIAGIAAA
LEGVAKVVAV EPRTAPTLHS ALAAGEPVDV RVAGVAADSL GASRVGDIAF AVARRTGVES
LLVDDQAITD ARGLLWSEYR QALEPGGATA YAALLGGAYR PESDERVAVV LCGANTNPAD
LA
|
|---|
| |